Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SNORA31.19-201ENST00000517079 126 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNA5SP290-201ENST00000517133 127 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AC060766.3-201ENST00000591442 263 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AP001485.1-201ENST00000604799 199 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AC072026.1-201ENST00000605023 201 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AL079305.1-201ENST00000623159 3008 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RNU6-173P-201ENST00000364215 104 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.383-201ENST00000383855 97 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RNU6-21P-201ENST00000384710 107 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.569-201ENST00000384749 103 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 MIR34A-201ENST00000385130 110 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RN7SKP167-201ENST00000411047 285 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AL159169.1-201ENST00000421119 127 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AL358453.1-201ENST00000422522 250 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 MTCO1P39-201ENST00000426148 480 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 TBCAP1-201ENST00000436520 327 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RPL7P47-201ENST00000497299 556 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RNU7-200P-201ENST00000516105 62 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RNU6-1256P-201ENST00000516539 103 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RNU7-110P-201ENST00000516891 62 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 CYCSP30-201ENST00000546447 172 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 H3F3AP1-201ENST00000559984 334 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AC010928.2-201ENST00000588017 287 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 AC009541.1-201ENST00000438279 2662 ntBASIC4.74□□□□□ -1.65
EFCC1Q9HA90 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EFCC1Q9HA90 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 SNORA25.1-201ENST00000362326 128 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 MIR183-201ENST00000384958 110 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 MIR32-201ENST00000384965 70 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 MIR218-2-201ENST00000385006 110 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 RNU2-61P-201ENST00000411069 191 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 RNA5SP306-201ENST00000411087 107 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 FTH1P6-201ENST00000430768 320 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC006011.1-201ENST00000442758 349 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC016700.2-201ENST00000446011 156 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AL353705.4-201ENST00000449661 238 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 RPL21P104-201ENST00000464143 478 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 RN7SL323P-201ENST00000494712 295 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 RNU6-572P-201ENST00000516724 80 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 IGKV2D-19-201ENST00000523346 262 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC005046.1-201ENST00000608515 625 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AL365265.1-201ENST00000621045 234 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 AL136964.1-201ENST00000622038 2990 ntBASIC4.73□□□□□ -1.65
EFCC1Q9HA90 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EFCC1Q9HA90 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 RNA5SP235-201ENST00000365411 114 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.398-201ENST00000383952 99 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.418-201ENST00000384029 102 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 MIR124-3-201ENST00000384866 87 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AC005002.2-201ENST00000438228 269 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AC009296.1-201ENST00000443146 155 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AC087477.1-201ENST00000465747 340 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 MRPL42P6-201ENST00000486397 371 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 RPL21P13-201ENST00000488305 481 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 SNORA31.18-201ENST00000517043 134 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 MIR3144-201ENST00000579460 79 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 SNORD113-5-201ENST00000607261 78 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 AL590240.4-201ENST00000616908 390 ntBASIC4.72□□□□□ -1.65
EFCC1Q9HA90 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
EFCC1Q9HA90 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
EFCC1Q9HA90 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
EFCC1Q9HA90 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
EFCC1Q9HA90 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
EFCC1Q9HA90 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
EFCC1Q9HA90 RNU4-9P-201ENST00000364951 139 ntBASIC4.71□□□□□ -1.66
EFCC1Q9HA90 RNU6-968P-201ENST00000384076 107 ntBASIC4.71□□□□□ -1.66
EFCC1Q9HA90 RNU6-514P-201ENST00000384208 107 ntBASIC4.71□□□□□ -1.66
EFCC1Q9HA90 Y_RNA.504-201ENST00000384481 104 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms