Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SNORA43.2-201ENST00000516652 128 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 SNORA31.24-201ENST00000517232 57 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.11□□□□□ -2.23
MED28Q9H204 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.11□□□□□ -2.23
MED28Q9H204 BNIP3P6-201ENST00000549284 499 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MED28Q9H204 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.11□□□□□ -2.23
MED28Q9H204 SUB1P3-201ENST00000564581 315 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 AC137800.2-201ENST00000574375 120 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.11□□□□□ -2.23
MED28Q9H204 MIR4513-201ENST00000581077 86 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 AC112187.2-201ENST00000604345 283 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 U6.42-201ENST00000618440 107 ntBASIC1.11□□□□□ -2.23
MED28Q9H204 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.11□□□□□ -2.23
MED28Q9H204 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
MED28Q9H204 AL445523.1-201ENST00000451184 1362 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 RNA5SP493-201ENST00000364115 91 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 SNORA26.9-201ENST00000391322 122 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AL365400.1-201ENST00000431854 640 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 RPS15AP10-201ENST00000432472 382 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AL590365.1-201ENST00000450788 243 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC006026.2-201ENST00000457376 180 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 RPL30P12-201ENST00000474666 353 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 UBL5P3-201ENST00000475112 231 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC010409.1-201ENST00000487382 476 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC134050.1-201ENST00000495088 933 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.1□□□□□ -2.23
MED28Q9H204 AC009646.1-201ENST00000510455 318 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 SNORA31.17-201ENST00000516953 127 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.1□□□□□ -2.23
MED28Q9H204 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MED28Q9H204 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MED28Q9H204 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.1□□□□□ -2.23
MED28Q9H204 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.1□□□□□ -2.23
MED28Q9H204 MIR3169-201ENST00000578032 83 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.1□□□□□ -2.23
MED28Q9H204 MIR3118-1-201ENST00000581787 76 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AC013244.3-201ENST00000605614 388 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 AL359547.2-201ENST00000615810 418 ntBASIC1.1□□□□□ -2.23
MED28Q9H204 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
MED28Q9H204 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.09□□□□□ -2.23
MED28Q9H204 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
MED28Q9H204 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 RNU6-384P-201ENST00000364900 104 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 RNU6-1242P-201ENST00000391052 103 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 NCOR1P3-201ENST00000420479 303 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AL358453.1-201ENST00000422522 250 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.09□□□□□ -2.23
MED28Q9H204 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.09□□□□□ -2.23
MED28Q9H204 AC105185.1-201ENST00000518705 535 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AC011979.2-201ENST00000527568 352 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.09□□□□□ -2.23
MED28Q9H204 SUB1P4-201ENST00000566062 339 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.09□□□□□ -2.23
MED28Q9H204 MIR548AC-201ENST00000585049 88 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 DEFB131E-202ENST00000602581 683 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AL353778.1-201ENST00000603149 408 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AC121334.2-201ENST00000605387 271 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AC009318.2-201ENST00000610917 651 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 AC008993.2-201ENST00000631744 806 ntBASIC1.09□□□□□ -2.23
MED28Q9H204 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
MED28Q9H204 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.09□□□□□ -2.23
MED28Q9H204 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MED28Q9H204 SNORD56.1-201ENST00000362913 68 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.08□□□□□ -2.24
MED28Q9H204 RNU6-160P-201ENST00000384591 107 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 SNORA67.6-201ENST00000391093 99 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 RPS3AP36-201ENST00000398190 775 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 BTF3L4P1-201ENST00000413813 468 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AL031779.1-201ENST00000415663 330 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MED28Q9H204 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.08□□□□□ -2.24
MED28Q9H204 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.08□□□□□ -2.24
MED28Q9H204 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.08□□□□□ -2.24
MED28Q9H204 EXOSC3P1-201ENST00000448649 500 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 USP9YP25-201ENST00000457708 443 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.08□□□□□ -2.24
MED28Q9H204 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.08□□□□□ -2.24
MED28Q9H204 snoU13.9-201ENST00000458927 103 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.08□□□□□ -2.24
MED28Q9H204 SNORD53B-201ENST00000577887 78 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 MIR4422-201ENST00000581938 83 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 BNIP3P40-201ENST00000596017 556 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AC022022.2-201ENST00000602989 360 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AL158032.1-201ENST00000605401 106 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AP002360.4-201ENST00000606980 481 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AL590240.4-201ENST00000616908 390 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AC130454.1-201ENST00000622948 401 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 AP002782.1-201ENST00000623107 614 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MED28Q9H204 ZNF72P-201ENST00000425869 1908 ntBASIC1.08□□□□□ -2.24
MED28Q9H204 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MED28Q9H204 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MED28Q9H204 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms