Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SNORA68.1-201ENST00000364537 132 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RPS29P13-201ENST00000402041 169 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RNU4-47P-201ENST00000410876 114 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 PDCL2P1-201ENST00000419302 352 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 MTND4LP16-201ENST00000440828 295 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 Z96811.1-201ENST00000445880 108 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AL441985.1-201ENST00000457727 251 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RN7SL863P-201ENST00000462370 296 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 RPL27AP5-201ENST00000469428 449 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC008526.1-201ENST00000509149 338 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC026371.1-201ENST00000551867 419 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 MTCO3P13-201ENST00000577757 781 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AL137843.1-201ENST00000605078 385 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 uc_338.14-201ENST00000613162 166 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 AC093831.2-201ENST00000624393 3427 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCGF1Q9BSM1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.98
PCGF1Q9BSM1 RNA5SP374-201ENST00000362939 125 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 U3.6-201ENST00000363622 211 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 Y_RNA.166-201ENST00000363730 102 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU6-487P-201ENST00000365430 104 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 SNORD116-11-201ENST00000383882 92 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU6-622P-201ENST00000384272 103 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNA5SP229-201ENST00000410809 99 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 Z92545.1-201ENST00000411782 234 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RPL32P35-201ENST00000415214 394 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 NUP35P1-201ENST00000422734 947 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AL590632.1-201ENST00000424289 371 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC007969.2-201ENST00000441891 191 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AL353572.1-201ENST00000442490 417 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 MTCO2P3-201ENST00000442543 421 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 MTND4P18-201ENST00000447010 465 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC115115.1-201ENST00000449927 248 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RN7SL75P-201ENST00000461926 281 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC133134.1-201ENST00000466800 359 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC109925.1-201ENST00000478069 331 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AK3P2-201ENST00000507976 429 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNA5SP217-201ENST00000515959 91 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU1-143P-201ENST00000516296 146 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC009314.1-201ENST00000603871 304 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 U1.23-201ENST00000610293 146 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 RNU1-68P-201ENST00000615382 146 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AC092794.2-201ENST00000620933 563 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 MIR8057-201ENST00000620957 69 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 U1.39-201ENST00000621562 146 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 AL109809.4-201ENST00000603520 2185 ntBASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCGF1Q9BSM1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 AL353743.1-202ENST00000431724 1695 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RNU6-562P-201ENST00000362731 107 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RNU6-95P-201ENST00000384697 107 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 MIR128-1-201ENST00000384921 82 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RN7SKP32-201ENST00000410167 303 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RN7SKP220-201ENST00000410611 288 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
PCGF1Q9BSM1 AL591043.1-201ENST00000432461 424 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 429.5 ms