Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC130324.3-201ENST00000614165 542 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RMST_4.1-201ENST00000616886 107 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AL161781.1-201ENST00000354277 403 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU6-792P-201ENST00000363490 107 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU6-707P-201ENST00000364647 95 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU6-166P-201ENST00000384371 107 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 MIR520A-201ENST00000384862 85 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 MIR532-201ENST00000385025 91 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AL079342.2-201ENST00000403367 482 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU2-7P-201ENST00000410794 178 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AL078601.1-201ENST00000444542 271 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 MTCO2P25-201ENST00000447065 681 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 SNRPFP4-201ENST00000456366 242 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU7-95P-201ENST00000459222 64 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 COX6CP14-201ENST00000469580 174 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 HMGB1P28-201ENST00000507778 552 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 RNA5SP121-201ENST00000516537 101 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 BNIP3P31-201ENST00000604515 566 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC005332.6-201ENST00000613178 446 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 AC112204.3-201ENST00000623822 332 ntBASIC0.41□□□□□ -2.34
VPS25Q9BRG1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
VPS25Q9BRG1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 MIR340-201ENST00000362125 95 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC083799.1-201ENST00000366451 910 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RNU6-843P-201ENST00000384454 104 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 MIR194-1-201ENST00000384892 85 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 SNORA40C-201ENST00000391285 128 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RPS15AP10-201ENST00000432472 382 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC099677.2-201ENST00000436385 175 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 MTND5P14-201ENST00000441481 1267 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RNU1-131P-201ENST00000458943 161 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RNA5SP168-201ENST00000516642 112 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 SLC2A13P1-201ENST00000531560 322 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 RPS3AP4-201ENST00000555161 764 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC137800.2-201ENST00000574375 120 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AL590095.2-201ENST00000604136 117 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 MIR6852-201ENST00000621699 66 ntBASIC0.4□□□□□ -2.35
VPS25Q9BRG1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS25Q9BRG1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 MIR16-2-201ENST00000362117 81 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNA5SP361-201ENST00000362686 118 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU1-17P-201ENST00000363022 152 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 Y_RNA.124-201ENST00000363339 93 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 Y_RNA.408-201ENST00000383987 102 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU6-622P-201ENST00000384272 103 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 MIR29B2-201ENST00000385055 81 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU11-5P-201ENST00000391216 129 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RAP1BP3-201ENST00000407180 549 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 MIR1289-2-201ENST00000408360 111 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU4-62P-201ENST00000410125 130 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 DPRXP1-201ENST00000426312 460 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 TXNL1P1-201ENST00000429528 554 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AL365400.1-201ENST00000431854 640 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 ELOCP30-201ENST00000447108 299 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 HMGB1P30-201ENST00000492455 606 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 RNU6-583P-201ENST00000516012 92 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AP003484.1-201ENST00000530974 250 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS25Q9BRG1 SNORA59B-202ENST00000578183 701 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC060771.1-201ENST00000582031 164 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AP001004.1-201ENST00000582468 324 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 MIR6857-201ENST00000613267 93 ntBASIC0.39□□□□□ -2.35
VPS25Q9BRG1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms