Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC093151.1-201ENST00000427711 313 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.89□□□□□ -1.95
PKP4Q99569 RPL32P28-201ENST00000443577 397 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP4Q99569 Y_RNA.639-201ENST00000458981 102 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC027575.1-201ENST00000481064 460 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC096576.1-201ENST00000489014 359 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.89□□□□□ -1.95
PKP4Q99569 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.89□□□□□ -1.95
PKP4Q99569 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP4Q99569 AP002404.1-201ENST00000532005 451 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.89□□□□□ -1.95
PKP4Q99569 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.89□□□□□ -1.95
PKP4Q99569 MIR5692C1-201ENST00000585309 91 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP4Q99569 AC080078.3-201ENST00000605407 463 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 RPL23AP88-201ENST00000605759 454 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 MIR15A-201ENST00000607334 83 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AL138726.1-201ENST00000614873 333 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AC034102.8-201ENST00000615146 484 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP4Q99569 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP4Q99569 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKP4Q99569 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKP4Q99569 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PKP4Q99569 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.88□□□□□ -1.95
PKP4Q99569 RNU6-128P-201ENST00000383976 107 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 RNU6-45P-201ENST00000384471 107 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AL138885.1-201ENST00000405921 675 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 MIR548P-201ENST00000408336 84 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 RNU6-370P-201ENST00000411008 104 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 SNAP23P1-201ENST00000433229 246 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP4Q99569 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP4Q99569 RNU7-152P-201ENST00000458982 64 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 RPL27AP5-201ENST00000469428 449 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AC008526.1-201ENST00000509149 338 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AC005741.1-201ENST00000511094 432 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 CYCSP27-201ENST00000527643 293 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 APOOP3-201ENST00000536787 586 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.88□□□□□ -1.95
PKP4Q99569 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.88□□□□□ -1.95
PKP4Q99569 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKP4Q99569 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 FAM157A-202ENST00000615155 405 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 ATP5A1P2-202ENST00000616464 443 ntBASIC2.88□□□□□ -1.95
PKP4Q99569 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP4Q99569 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKP4Q99569 AL355596.1-201ENST00000565399 3996 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PKP4Q99569 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKP4Q99569 RNU6-562P-201ENST00000362731 107 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 SNORA4.3-201ENST00000365564 137 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 Y_RNA.482-201ENST00000384377 111 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AL139397.2-201ENST00000404529 772 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 RPS4XP7-201ENST00000406274 780 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AL513475.1-201ENST00000406602 315 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP4Q99569 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.87□□□□□ -1.95
PKP4Q99569 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP4Q99569 SKA2P1-201ENST00000425592 390 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 RPL37P4-201ENST00000448908 268 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 RPL26P9-201ENST00000457466 433 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 RPL21P41-201ENST00000459863 264 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 HMGN1P10-201ENST00000474557 553 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 SUMO2P6-201ENST00000505273 288 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
PKP4Q99569 AC079140.5-201ENST00000507882 310 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.87□□□□□ -1.95
PKP4Q99569 RNU6-914P-201ENST00000516749 109 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 RNA5SP290-201ENST00000517133 127 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.87□□□□□ -1.95
PKP4Q99569 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.87□□□□□ -1.95
PKP4Q99569 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP4Q99569 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP4Q99569 MIR5692A1-201ENST00000580523 69 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 MIR5690-201ENST00000583739 73 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 MIR3171-201ENST00000584270 74 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 HMGN2P15-201ENST00000585707 270 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AL080274.1-201ENST00000605565 220 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 AC124303.1-201ENST00000605703 360 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.87□□□□□ -1.95
PKP4Q99569 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.87□□□□□ -1.95
PKP4Q99569 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKP4Q99569 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PKP4Q99569 AL353743.1-202ENST00000431724 1695 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PKP4Q99569 MIR369-201ENST00000362155 70 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 Y_RNA.146-201ENST00000363549 102 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 Y_RNA.187-201ENST00000363918 113 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 RNU6-371P-201ENST00000364283 108 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 RNU6-474P-201ENST00000384243 107 ntBASIC2.86□□□□□ -1.95
PKP4Q99569 Y_RNA.534-201ENST00000384599 112 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms