Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HPRT1P3-201ENST00000539521 576 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 GLYCAM1-201ENST00000546596 285 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 FRG2DP-202ENST00000566967 323 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AL160281.1-201ENST00000605307 311 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 MIR3199-2-201ENST00000636243 86 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC006026.1-201ENST00000444025 1803 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CDK5RAP3Q96JB5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 SNORD62.1-201ENST00000362541 86 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-78P-201ENST00000362897 107 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-1280P-201ENST00000365211 107 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNA5SP274-201ENST00000410484 108 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 MTND4P28-201ENST00000426217 387 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL645568.3-201ENST00000433683 316 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RPS15AP5-201ENST00000436276 388 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RPS12P18-201ENST00000442381 270 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RN7SL504P-201ENST00000494496 287 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 SLC25A15P5-201ENST00000508033 253 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-377P-201ENST00000515965 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 RNU1-54P-201ENST00000517181 120 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AC068657.1-201ENST00000520807 306 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AC103996.1-201ENST00000555468 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL121821.2-201ENST00000556081 394 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AL355877.2-201ENST00000603670 358 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 UCA1.1-201ENST00000620952 75 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 AC244517.12-201ENST00000623581 663 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 MIR622-201ENST00000638396 96 ntBASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.46□□□□□ -1.86
CDK5RAP3Q96JB5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 CDC27P3-201ENST00000635418 1910 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU1-100P-201ENST00000365255 165 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.482-201ENST00000384377 111 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-1297P-201ENST00000384415 104 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-601P-201ENST00000384540 107 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-306P-201ENST00000384617 107 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-293P-201ENST00000411259 106 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-1304P-201ENST00000411374 106 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC023141.4-201ENST00000412031 328 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 BX510359.1-201ENST00000456973 237 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC018437.1-201ENST00000492214 406 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AK3P2-201ENST00000507976 429 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC022634.1-201ENST00000520765 532 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC006199.1-201ENST00000548728 219 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 IMMP1LP2-201ENST00000552954 492 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 MIR5004-201ENST00000579078 107 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 AC138627.2-201ENST00000624202 601 ntBASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP3Q96JB5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-428P-201ENST00000362942 107 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 Y_RNA.151-201ENST00000363566 112 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 SNORD46.1-201ENST00000364139 104 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 SNORA46-201ENST00000384762 135 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-370P-201ENST00000411008 104 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AL117339.3-201ENST00000418733 162 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 RPS15AP10-201ENST00000432472 382 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC236972.2-201ENST00000434979 310 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 UQCRHP3-201ENST00000451503 251 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC006026.2-201ENST00000457376 180 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 RNU6-1037P-201ENST00000459571 107 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC116655.1-201ENST00000508324 901 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC116337.1-201ENST00000509680 687 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 SNORA43.2-201ENST00000516652 128 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 TRAV32-201ENST00000553993 340 ntBASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP3Q96JB5 RPL23AP78-201ENST00000599928 470 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms