Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 BX276092.6-201ENST00000430476 250 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-CQ95604 BX276092.8-201ENST00000455722 250 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 AC092991.1-201ENST00000477176 376 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 AC006517.1-201ENST00000480485 328 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 AC073073.1-201ENST00000493920 463 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 ENPP7P11-201ENST00000505915 627 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 AC093591.2-201ENST00000565254 3843 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 AC008739.3-201ENST00000603262 127 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 MAPK10-328ENST00000641553 4009 ntBASIC4.91□□□□□ -1.62
HLA-CQ95604 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-CQ95604 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-CQ95604 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-CQ95604 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-CQ95604 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HLA-CQ95604 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-CQ95604 Y_RNA.24-201ENST00000362508 103 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 RNU6-728P-201ENST00000365375 104 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 Y_RNA.415-201ENST00000384012 112 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 SNORA1.3-201ENST00000384676 136 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 CRYBB2P1-203ENST00000415709 538 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 RN7SL98P-201ENST00000462271 300 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 RPL31P41-201ENST00000477967 372 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 RN7SL558P-201ENST00000497468 299 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 SCARNA8-201ENST00000515924 131 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 AC021739.1-201ENST00000559631 174 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 AC011471.1-201ENST00000585766 187 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-CQ95604 AC068205.3-201ENST00000636385 468 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 MIR6844-201ENST00000637122 62 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HLA-CQ95604 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HLA-CQ95604 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-CQ95604 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-CQ95604 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
HLA-CQ95604 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.63
HLA-CQ95604 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-CQ95604 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-CQ95604 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-CQ95604 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-CQ95604 AC006971.1-201ENST00000407916 4486 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-CQ95604 RNU6-1205P-201ENST00000363625 106 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RNU6-407P-201ENST00000365280 104 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 Y_RNA.361-201ENST00000365515 120 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RNU6-969P-201ENST00000383900 105 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RNY3P5-201ENST00000384127 102 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RNU6-1144P-201ENST00000384247 104 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 SNORA48.4-201ENST00000391089 134 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RPL21P17-201ENST00000397467 475 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 AL714022.1-201ENST00000439897 151 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RPS27P1-201ENST00000450552 247 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-CQ95604 AC103975.1-201ENST00000482506 483 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 AC078918.1-201ENST00000498515 228 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 AC006499.6-201ENST00000511169 607 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 RNU6-107P-201ENST00000516643 102 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 Y_RNA.709-201ENST00000516952 92 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 ACA59.2-201ENST00000517061 156 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 AC105129.1-201ENST00000560250 297 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.89□□□□□ -1.63
HLA-CQ95604 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-CQ95604 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-CQ95604 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-CQ95604 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-CQ95604 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-CQ95604 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-CQ95604 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 SNORA71.3-201ENST00000362582 128 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 RNA5SP283-201ENST00000365604 119 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 CBX3P9-201ENST00000402326 552 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 RNU4-43P-201ENST00000410628 137 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms