Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 RN7SL283P-201ENST00000489055 303 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 MTND3P25-201ENST00000509243 135 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 RN7SKP272-201ENST00000516988 232 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AP001836.1-201ENST00000604675 523 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 MIR7106-201ENST00000612419 65 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 AL031601.2-202ENST00000622650 282 ntBASIC3.22□□□□□ -1.89
ATP2A3Q93084 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A3Q93084 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A3Q93084 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.21□□□□□ -1.89
ATP2A3Q93084 Y_RNA.315-201ENST00000365117 102 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 AL353621.1-201ENST00000418219 243 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC236972.1-201ENST00000433225 199 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC005741.1-201ENST00000511094 432 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 Y_RNA.682-201ENST00000516457 100 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 RNU6-56P-201ENST00000516986 93 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC069113.1-201ENST00000517763 267 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC025755.1-201ENST00000521306 278 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 APOOP1-201ENST00000604695 592 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC124303.1-201ENST00000605703 360 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A3Q93084 uc_338.15-201ENST00000615470 191 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
ATP2A3Q93084 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A3Q93084 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A3Q93084 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 RNU6-254P-201ENST00000363377 107 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 RNU6-1303P-201ENST00000364841 107 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 Y_RNA.387-201ENST00000383918 102 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 SNORA54-201ENST00000384281 123 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP2A3Q93084 MIR450B-201ENST00000401182 78 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 MIR548F5-201ENST00000408421 86 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 RNU6-607P-201ENST00000411283 108 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC022018.1-201ENST00000430685 241 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC025750.2-201ENST00000442609 450 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 BRK1P2-201ENST00000442875 223 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 RNU6-559P-201ENST00000516151 98 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 MIR892C-201ENST00000516410 77 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC009902.1-201ENST00000519351 183 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 ELOCP31-201ENST00000540463 467 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AL121821.2-201ENST00000556081 394 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 LRRC37A5P-203ENST00000580181 585 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 MIR3171-201ENST00000584270 74 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 RPL23AP78-201ENST00000599928 470 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC002044.1-201ENST00000606707 158 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
ATP2A3Q93084 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A3Q93084 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 RNU6-266P-201ENST00000364225 107 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
ATP2A3Q93084 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
ATP2A3Q93084 MYL8P-204ENST00000431574 518 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms