Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 SNORA70.22-201ENST00000517160 124 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC125611.1-201ENST00000549563 229 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC233702.2-202ENST00000562547 291 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC004987.4-201ENST00000603383 338 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC092125.1-201ENST00000562568 1995 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RPL23AP54-201ENST00000495129 419 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RNU6-197P-201ENST00000516680 100 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 MIR3167-201ENST00000579623 85 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 FTX_3.1-201ENST00000610451 147 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC009033.1-201ENST00000624279 431 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RNU6-486P-201ENST00000363116 107 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 SNORD115-41-201ENST00000363608 82 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RNU6-348P-201ENST00000384386 107 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RNU6-950P-201ENST00000384651 107 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 RNA5SP496-201ENST00000391240 109 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 BPY2DP-201ENST00000422208 265 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC105758.1-201ENST00000506038 399 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC009268.1-201ENST00000561352 1203 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AL713866.2-201ENST00000603579 219 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC239868.4-201ENST00000608318 671 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 AL159972.1-201ENST00000625150 448 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 PCMTD1P7-201ENST00000634506 357 ntBASIC0.08□□□□□ -2.4
ALMS1Q8TCU4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 RNU4-32P-201ENST00000363404 141 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNORD14D-201ENST00000384390 87 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AP1S2P1-201ENST00000457344 379 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC112206.3-201ENST00000514578 389 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 RPL30P11-203ENST00000598995 310 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC112220.3-201ENST00000605502 502 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC090116.1-201ENST00000615679 446 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AL138713.1-201ENST00000624026 2130 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AL109659.3-201ENST00000624985 950 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 Z99571.1-201ENST00000636677 394 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNORD3E-201ENST00000362899 217 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 MIR1290-201ENST00000408735 78 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 HMGB1P51-201ENST00000605166 638 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC004775.1-201ENST00000607389 753 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC006213.4-201ENST00000616184 634 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNORD49B-201ENST00000365172 72 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 RNU4-12P-201ENST00000365233 139 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNORD82-201ENST00000365530 70 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 MIR95-201ENST00000385072 81 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 SNX2P2-201ENST00000424553 323 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 HMGN2P22-201ENST00000427588 175 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC016717.1-201ENST00000448918 286 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC010631.1-201ENST00000474150 156 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 RPL36AP48-201ENST00000485521 314 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC008494.2-201ENST00000514544 370 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC012213.3-201ENST00000577199 777 ntBASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.07□□□□□ -2.4
ALMS1Q8TCU4 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 Y_RNA.468-201ENST00000384298 102 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 SNORA32.3-201ENST00000384772 121 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 MIR29C-201ENST00000385231 88 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 SNX3P1X-201ENST00000414887 175 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC139712.2-201ENST00000424302 339 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC074198.2-201ENST00000508153 258 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 HMGB1P33-201ENST00000563485 527 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 RSL24D1P11-201ENST00000591045 491 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC022432.1-201ENST00000595739 310 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 KATNBL1P5-201ENST00000605015 517 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC069304.2-201ENST00000605154 435 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC004908.3-201ENST00000610248 625 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 CCNG1P1-201ENST00000406783 885 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 BET1P1-201ENST00000482276 359 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 RNU6-202P-201ENST00000515998 96 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 MIR3937-201ENST00000580135 106 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AC012669.1-201ENST00000603209 283 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 RNU4-18P-201ENST00000516751 149 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.06□□□□□ -2.4
ALMS1Q8TCU4 GDI2P1-201ENST00000429312 1336 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms