Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 RPL23AP75-201ENST00000491601 451 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 FCF1P8-201ENST00000510322 597 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 RNU5E-3P-201ENST00000515913 68 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 RN7SKP49-201ENST00000516675 260 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 YPEL5P3-201ENST00000547227 352 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 AL157871.3-201ENST00000557231 293 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 MTND6P33-201ENST00000571794 183 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 AC011603.4-201ENST00000611325 277 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 AL360181.4-201ENST00000621752 134 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 SCARNA4-201ENST00000629045 128 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 ZNF204P-201ENST00000416749 2397 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
NEDD1Q8NHV4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 RNU6-1272P-201ENST00000362776 107 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 SSXP9-201ENST00000417503 292 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 AC063976.4-201ENST00000421971 163 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 AL138785.1-201ENST00000425821 331 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 RN7SL271P-201ENST00000487601 295 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 RPL21P13-201ENST00000488305 481 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 Y_RNA.712-201ENST00000517011 92 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 AC022968.1-201ENST00000567372 442 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 MIR3145-201ENST00000580727 82 ntBASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD1Q8NHV4 AC092593.1-201ENST00000515413 1815 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 FTLP6-201ENST00000355274 422 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 RNU6-381P-201ENST00000391259 108 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 SNORA11-201ENST00000408789 128 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 Z82210.1-201ENST00000440037 231 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AC096638.1-201ENST00000444678 216 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AL359073.1-201ENST00000448036 403 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 MTATP6P7-201ENST00000453315 681 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 Y_RNA.797-201ENST00000515977 94 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AL391261.3-201ENST00000557194 520 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AL139395.1-201ENST00000603662 160 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 LINC00901.1-201ENST00000617252 152 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 AC016588.2-201ENST00000632484 3021 ntBASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NEDD1Q8NHV4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 RNA5SP399-201ENST00000364003 117 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 SNORD73B-201ENST00000364394 72 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 SNORD14B-201ENST00000364533 90 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 MIR134-201ENST00000385258 73 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 RNU6-460P-201ENST00000391158 108 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 BTF3P11-201ENST00000426582 477 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 RPS29P7-201ENST00000439662 171 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 MTCO1P44-201ENST00000441935 243 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC092991.1-201ENST00000477176 376 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 RNA5SP471-201ENST00000516971 106 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 SNORA31.22-201ENST00000517204 135 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC022790.1-201ENST00000522872 204 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC008489.1-201ENST00000524271 483 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC091167.4-201ENST00000605079 184 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 AC022441.3-201ENST00000605737 136 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 snoZ196.1-201ENST00000625269 89 ntBASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEDD1Q8NHV4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD1Q8NHV4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEDD1Q8NHV4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.68□□□□□ -1.66
NEDD1Q8NHV4 Z82217.1-201ENST00000625157 8149 ntBASIC4.68□□□□□ -1.66
NEDD1Q8NHV4 AC009812.4-201ENST00000569134 1805 ntBASIC4.68□□□□□ -1.66
NEDD1Q8NHV4 UBE2L2-201ENST00000254302 429 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms