Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MTND4P14-201ENST00000435799 1354 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC89Q8N998 snoU2_19.1-201ENST00000362361 80 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 RNU6-105P-201ENST00000363909 104 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 U3.13-201ENST00000364804 214 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 RNU6-1303P-201ENST00000364841 107 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 MTATP6P18-201ENST00000417994 673 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.54□□□□□ -2
CCDC89Q8N998 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.54□□□□□ -2
CCDC89Q8N998 AC079382.1-201ENST00000493346 557 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 SLC25A15P5-201ENST00000508033 253 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.54□□□□□ -2
CCDC89Q8N998 AC010493.1-201ENST00000513479 292 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC89Q8N998 AC022616.8-201ENST00000533569 253 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.54□□□□□ -2
CCDC89Q8N998 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.54□□□□□ -2
CCDC89Q8N998 AL158211.1-201ENST00000566763 763 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 Z82243.1-201ENST00000609432 473 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 Z69908.1-201ENST00000622603 247 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 AC097372.5-201ENST00000623665 376 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 MIR3974-201ENST00000637126 96 ntBASIC2.54□□□□□ -2
CCDC89Q8N998 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 ZNF680P1-201ENST00000436625 1469 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC89Q8N998 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
CCDC89Q8N998 RNU6-348P-201ENST00000384386 107 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 MIR491-201ENST00000384877 84 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AF228730.1-201ENST00000397972 663 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
CCDC89Q8N998 AC090960.1-201ENST00000421072 306 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AL590556.1-201ENST00000423231 483 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.53□□□□□ -2
CCDC89Q8N998 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
CCDC89Q8N998 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AL356010.1-201ENST00000456364 102 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AL122001.1-201ENST00000457027 370 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CCDC89Q8N998 RPS27P21-201ENST00000486977 252 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 RNU2-69P-201ENST00000516061 100 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 CYCSP27-201ENST00000527643 293 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 AC018630.3-201ENST00000542637 96 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.53□□□□□ -2
CCDC89Q8N998 MIR3941-201ENST00000582572 103 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
CCDC89Q8N998 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.53□□□□□ -2
CCDC89Q8N998 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC89Q8N998 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.53□□□□□ -2
CCDC89Q8N998 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC89Q8N998 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 MIR518A2-201ENST00000384966 87 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC89Q8N998 RNU2-48P-201ENST00000410694 191 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC89Q8N998 DNAJC19P4-201ENST00000440115 345 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 SCARNA18-201ENST00000459004 134 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 AC091805.2-201ENST00000603848 235 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 AL160281.1-201ENST00000605307 311 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
CCDC89Q8N998 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC89Q8N998 AC008555.8-201ENST00000623602 2168 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 ELL2P3-201ENST00000457883 1602 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 HMGB3P2-201ENST00000411913 584 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 SNORD56-201ENST00000413522 71 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AL513328.1-201ENST00000446460 224 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 SNRPFP3-201ENST00000457792 225 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 RPS3AP14-201ENST00000483907 780 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC89Q8N998 MIR4287-201ENST00000579398 78 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC004908.3-201ENST00000610248 625 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC135507.2-201ENST00000612443 309 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AL132822.1-201ENST00000617063 513 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AL162373.1-201ENST00000620433 407 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms