Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 Y_RNA.309-201ENST00000365046 111 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 MIR30B-201ENST00000384850 88 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 RN7SKP156-201ENST00000410308 342 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 SNORA57.3-201ENST00000411095 141 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AL357134.1-201ENST00000445848 426 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 EEF1B2P7-201ENST00000451177 676 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 FABP5P15-201ENST00000453566 214 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 HSPE1P6-201ENST00000479457 291 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC022790.1-201ENST00000522872 204 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC009127.3-201ENST00000570531 403 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC012468.1-201ENST00000604888 430 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AC007390.2-201ENST00000606229 3803 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 MIR3658-201ENST00000636291 56 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 AL365440.1-201ENST00000436135 2167 ntBASIC5.21□□□□□ -1.58
RC3H1Q5TC82 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 U8.11-201ENST00000384699 133 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 U8.12-201ENST00000384701 133 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 HLFP1-201ENST00000402375 499 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC124916.1-201ENST00000444020 547 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 ABCF2P2-201ENST00000450549 296 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 U8.18-201ENST00000459285 133 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 RAC1P5-201ENST00000512182 576 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC107027.2-201ENST00000512197 115 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 RNU1-95P-201ENST00000516357 160 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 RNU1-128P-201ENST00000516704 160 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 Y_RNA.709-201ENST00000516952 92 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 MIR3145-201ENST00000580727 82 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC007179.3-201ENST00000604976 235 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC019176.2-201ENST00000611579 315 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 MIR6129-201ENST00000616087 109 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC009093.8-201ENST00000641769 292 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AC009812.4-201ENST00000569134 1805 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.2□□□□□ -1.58
RC3H1Q5TC82 AL672167.1-205ENST00000641112 3080 ntBASIC5.2□□□□□ -1.58
RC3H1Q5TC82 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RNU6-78P-201ENST00000362897 107 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RNU6-199P-201ENST00000362954 107 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RNU6-476P-201ENST00000384726 107 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RNU6-159P-201ENST00000391080 106 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 SNORA40C-201ENST00000391285 128 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 MIR1271-201ENST00000408537 86 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 EIF1AXP1-201ENST00000419267 435 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 AL138785.1-201ENST00000425821 331 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 Z82210.1-201ENST00000440037 231 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 AC115990.1-201ENST00000526957 301 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 AP004242.1-201ENST00000533701 349 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 UBL5P4-201ENST00000562584 236 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 AC011603.4-201ENST00000611325 277 ntBASIC5.19□□□□□ -1.58
RC3H1Q5TC82 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RC3H1Q5TC82 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 RNU6-137P-201ENST00000363680 108 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 Y_RNA.172-201ENST00000363765 102 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 Y_RNA.319-201ENST00000365138 92 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 snoU13.3-201ENST00000459441 104 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 AC108751.2-201ENST00000469993 231 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 RN7SL323P-201ENST00000494712 295 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 RNU6-966P-201ENST00000516479 104 ntBASIC5.18□□□□□ -1.58
RC3H1Q5TC82 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RC3H1Q5TC82 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.17□□□□□ -1.58
RC3H1Q5TC82 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms