Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MTND4P32-201ENST00000437189 1237 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.82□□□□□ -2.12
RFX4Q33E94 MTND1P27-201ENST00000451117 902 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MED28P2-201ENST00000475771 317 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.82□□□□□ -2.12
RFX4Q33E94 ARL2BPP4-201ENST00000506854 471 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MTCO3P9-201ENST00000506989 781 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MTND3P25-201ENST00000509243 135 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 RNA5SP112-201ENST00000515937 99 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 RNU5B-3P-201ENST00000516601 115 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.82□□□□□ -2.12
RFX4Q33E94 AC007229.1-201ENST00000590455 412 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 AC119751.7-201ENST00000600494 245 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 RBBP8P1-201ENST00000449447 1844 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 ELL2P3-201ENST00000457883 1602 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 RNU6-1097P-201ENST00000363586 107 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.81□□□□□ -2.12
RFX4Q33E94 RNU2-3P-201ENST00000410144 191 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 RN7SKP158-201ENST00000410453 326 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 RNU6-387P-201ENST00000411331 105 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AL139156.1-201ENST00000412785 841 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 CYCSP33-201ENST00000414485 327 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AL353621.1-201ENST00000418219 243 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 PIGFP2-201ENST00000421400 651 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 RPS3AP44-201ENST00000425466 790 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 MTCO2P11-201ENST00000431069 680 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 MTCO1P19-201ENST00000443487 500 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 C1DP4-201ENST00000455429 424 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 RPS29P15-201ENST00000458329 171 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AC018437.1-201ENST00000492214 406 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 AC118273.2-201ENST00000532092 465 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 AP005136.1-201ENST00000579765 429 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
RFX4Q33E94 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.81□□□□□ -2.12
RFX4Q33E94 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RFX4Q33E94 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RFX4Q33E94 RNU6-858P-201ENST00000362436 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFX4Q33E94 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RFX4Q33E94 RNU6-1029P-201ENST00000384109 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 RNU6-456P-201ENST00000384493 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 MIR1302-8-201ENST00000408342 128 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AL669831.1-202ENST00000428504 417 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 GTF2IP13-201ENST00000438487 386 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX4Q33E94 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX4Q33E94 RNU6-956P-201ENST00000458868 103 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AP001025.1-201ENST00000486139 332 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 AC117532.1-201ENST00000514638 323 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 Y_RNA.688-201ENST00000516565 95 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AP004607.1-201ENST00000524456 203 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.8□□□□□ -2.12
RFX4Q33E94 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX4Q33E94 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX4Q33E94 RNU6-91P-201ENST00000607774 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 RMST_4.1-201ENST00000616886 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 U6.42-201ENST00000618440 107 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 AC009509.4-201ENST00000619202 509 ntBASIC1.8□□□□□ -2.12
RFX4Q33E94 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.8□□□□□ -2.12
RFX4Q33E94 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFX4Q33E94 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RFX4Q33E94 Y_RNA.159-201ENST00000363674 87 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 RNU6-1303P-201ENST00000364841 107 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 RNU6-843P-201ENST00000384454 104 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 Y_RNA.553-201ENST00000384670 102 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL023284.1-201ENST00000403956 276 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.79□□□□□ -2.12
RFX4Q33E94 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.79□□□□□ -2.12
RFX4Q33E94 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.79□□□□□ -2.12
RFX4Q33E94 MTCO2P16-201ENST00000436962 677 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 RPL7P12-201ENST00000446719 750 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC132479.1-201ENST00000449160 144 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL441985.1-201ENST00000457727 251 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC092436.1-201ENST00000506450 503 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AF213884.2-201ENST00000510417 903 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RFX4Q33E94 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.79□□□□□ -2.12
RFX4Q33E94 SNORA31.23-201ENST00000517219 133 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 MTCO2P4-201ENST00000517968 247 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL356057.1-201ENST00000533798 831 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 BNIP3P6-201ENST00000549284 499 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.79□□□□□ -2.12
RFX4Q33E94 AC136619.2-201ENST00000563361 631 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 MIR1273D-201ENST00000577266 86 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
RFX4Q33E94 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms