Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 CASP1P1-201ENST00000526345 212 ntBASIC3.89□□□□□ -1.79
NR1I3Q14994 AC104581.2-201ENST00000572227 430 ntBASIC3.89□□□□□ -1.79
NR1I3Q14994 AC007448.1-201ENST00000582714 234 ntBASIC3.89□□□□□ -1.79
NR1I3Q14994 RPL23AP78-201ENST00000599928 470 ntBASIC3.89□□□□□ -1.79
NR1I3Q14994 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
NR1I3Q14994 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.89□□□□□ -1.79
NR1I3Q14994 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.89□□□□□ -1.79
NR1I3Q14994 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR1I3Q14994 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NR1I3Q14994 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 Y_RNA.200-201ENST00000364018 102 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 RNY1-201ENST00000364228 113 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 RNU5E-7P-201ENST00000365290 117 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1I3Q14994 RNU6-886P-201ENST00000384319 105 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 RNU6-937P-201ENST00000384325 106 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 MIR34A-201ENST00000385130 110 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NR1I3Q14994 SNORD58.1-201ENST00000391313 66 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 RPS29P13-201ENST00000402041 169 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1I3Q14994 RPL17P36-201ENST00000420302 549 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 FTH1P6-201ENST00000430768 320 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 AL591043.1-201ENST00000432461 424 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 RPS4XP2-201ENST00000458402 793 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.88□□□□□ -1.79
NR1I3Q14994 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.88□□□□□ -1.79
NR1I3Q14994 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.88□□□□□ -1.79
NR1I3Q14994 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1I3Q14994 AL645944.1-201ENST00000603857 493 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 BX284668.6-201ENST00000606899 438 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.88□□□□□ -1.79
NR1I3Q14994 AC090132.2-201ENST00000615881 347 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 AC240442.1-201ENST00000616055 283 ntBASIC3.88□□□□□ -1.79
NR1I3Q14994 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NR1I3Q14994 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
NR1I3Q14994 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1I3Q14994 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1I3Q14994 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1I3Q14994 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 RNU6-222P-201ENST00000362438 107 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 RNY3P4-201ENST00000384428 101 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 RNU6-102P-201ENST00000384485 104 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 MIR124-3-201ENST00000384866 87 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 MIR1298-201ENST00000408783 112 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 RNA5SP31-201ENST00000411144 127 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 RN7SKP53-201ENST00000411337 315 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AL139156.1-201ENST00000412785 841 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 RPL21P40-201ENST00000428586 483 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1I3Q14994 AC104332.1-201ENST00000440471 797 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1I3Q14994 RPL23AP14-201ENST00000468281 468 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 ANXA2P1-201ENST00000505539 926 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1I3Q14994 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.87□□□□□ -1.79
NR1I3Q14994 AC022868.1-201ENST00000517767 391 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 MRPS36P4-201ENST00000534436 298 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1I3Q14994 AC060766.3-201ENST00000591442 263 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NR1I3Q14994 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NR1I3Q14994 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
NR1I3Q14994 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1I3Q14994 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1I3Q14994 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1I3Q14994 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1I3Q14994 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1I3Q14994 SNORD81.1-201ENST00000363064 77 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 SNORD113-8-201ENST00000363497 74 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 SNORA56-201ENST00000383966 129 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 RNU6-187P-201ENST00000384139 106 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.86□□□□□ -1.79
NR1I3Q14994 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NR1I3Q14994 AL078601.1-201ENST00000444542 271 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 SNORA70.19-201ENST00000516717 90 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 MIR4644-201ENST00000579929 84 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 MIR4659A-201ENST00000580269 81 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 Y_RNA.772-201ENST00000606692 102 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1I3Q14994 U4.7-201ENST00000638126 106 ntBASIC3.86□□□□□ -1.79
NR1I3Q14994 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms