Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RPL30P6-201ENST00000475925 342 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 RN7SKP219-201ENST00000516825 296 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC5Q00444 AL356057.1-201ENST00000533798 831 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC136618.2-201ENST00000575091 400 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC5Q00444 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.09□□□□□ -2.23
HOXC5Q00444 VN1R80P-201ENST00000597126 338 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 KC877982.1-201ENST00000602313 470 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AL355816.2-201ENST00000610049 647 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC063943.3-201ENST00000615562 356 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC024940.5-201ENST00000622889 474 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
HOXC5Q00444 ZNF680P1-201ENST00000436625 1469 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RNU6-433P-201ENST00000363216 104 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 Y_RNA.140-201ENST00000363474 103 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RNU6-487P-201ENST00000365430 104 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RNU6-946P-201ENST00000383878 107 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RNU6-1257P-201ENST00000384625 110 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXC5Q00444 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXC5Q00444 CBX3P9-201ENST00000402326 552 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 BTF3P4-201ENST00000418852 495 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC5Q00444 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC5Q00444 AL590365.1-201ENST00000450788 243 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 AC010409.1-201ENST00000487382 476 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC5Q00444 Y_RNA.689-201ENST00000516589 107 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 SNORA31.17-201ENST00000516953 127 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RNU6-1092P-201ENST00000516955 87 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RN7SKP256-201ENST00000517201 314 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.08□□□□□ -2.24
HOXC5Q00444 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.08□□□□□ -2.24
HOXC5Q00444 AC010376.1-201ENST00000522101 334 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 AC087441.2-201ENST00000529141 262 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 RRN3P3-201ENST00000549207 578 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXC5Q00444 AC112220.3-201ENST00000605502 502 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 MIR1248-201ENST00000629190 106 ntBASIC1.08□□□□□ -2.24
HOXC5Q00444 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXC5Q00444 CBX3P1-201ENST00000325243 554 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 MIR10A-201ENST00000385043 110 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 Y_RNA.597-201ENST00000410463 100 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 RNU2-23P-201ENST00000410545 195 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.07□□□□□ -2.24
HOXC5Q00444 RPL30P13-201ENST00000418873 348 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 RPS3AP37-201ENST00000419176 745 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.07□□□□□ -2.24
HOXC5Q00444 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.07□□□□□ -2.24
HOXC5Q00444 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.07□□□□□ -2.24
HOXC5Q00444 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXC5Q00444 RPL23AP35-201ENST00000451906 501 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 RPL36AP21-201ENST00000490372 323 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 MTCYBP40-201ENST00000509390 1135 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AP003034.1-201ENST00000534621 422 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 MIR3146-201ENST00000580367 79 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AC023043.2-201ENST00000589678 1026 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 MIR8074-201ENST00000615081 81 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 uc_338.12-201ENST00000616344 181 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AL590240.4-201ENST00000616908 390 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 AC106858.1-201ENST00000637497 429 ntBASIC1.07□□□□□ -2.24
HOXC5Q00444 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HOXC5Q00444 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.06□□□□□ -2.24
HOXC5Q00444 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HOXC5Q00444 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 Y_RNA.67-201ENST00000362870 100 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 Y_RNA.99-201ENST00000363138 105 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 RNU6-511P-201ENST00000363496 107 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 RNU5E-6P-201ENST00000365574 115 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 MIR29B2-201ENST00000385055 81 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 PIGPP2-201ENST00000411569 458 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 NCOR1P3-201ENST00000420479 303 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 USP9YP18-201ENST00000425912 695 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AL354941.1-201ENST00000438600 464 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.06□□□□□ -2.24
HOXC5Q00444 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
HOXC5Q00444 DUXAP8-207ENST00000456786 622 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 RPL30P12-201ENST00000474666 353 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AC104982.1-201ENST00000478775 574 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC5Q00444 RNU6-467P-201ENST00000517027 110 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC018630.3-201ENST00000542637 96 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AC023050.2-201ENST00000544968 387 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXC5Q00444 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC002400.1-201ENST00000569310 726 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC5Q00444 DEFB131E-202ENST00000602581 683 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms