Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.94□□□□□ -2.26
H3F3AP84243 AC018926.1-201ENST00000616335 435 ntBASIC0.94□□□□□ -2.26
H3F3AP84243 MIR1248-201ENST00000629190 106 ntBASIC0.94□□□□□ -2.26
H3F3AP84243 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.94□□□□□ -2.26
H3F3AP84243 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.93□□□□□ -2.26
H3F3AP84243 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
H3F3AP84243 RNA5SP327-201ENST00000362494 101 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 RNU6-212P-201ENST00000362642 104 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 Y_RNA.40-201ENST00000362645 93 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 RNY1P10-201ENST00000363268 113 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 RNU5B-4P-201ENST00000363508 111 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 RNU6-817P-201ENST00000391083 104 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AL359704.1-201ENST00000411586 781 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.93□□□□□ -2.26
H3F3AP84243 AC009518.2-201ENST00000418056 731 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AL365400.1-201ENST00000431854 640 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 GDI2P2-201ENST00000445131 608 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 HMGB1P30-201ENST00000492455 606 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.93□□□□□ -2.26
H3F3AP84243 AC027338.1-201ENST00000514840 825 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
H3F3AP84243 MIR3937-201ENST00000580135 106 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC078795.2-201ENST00000602835 1252 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC007363.1-201ENST00000604736 620 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC080078.3-201ENST00000605407 463 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 AC091895.1-201ENST00000624494 256 ntBASIC0.93□□□□□ -2.26
H3F3AP84243 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
H3F3AP84243 RNU6-112P-201ENST00000363599 104 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 MIR513A1-201ENST00000385138 129 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 RNU6-278P-201ENST00000390945 109 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 MTCO1P17-201ENST00000411522 491 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AC083875.1-201ENST00000419509 405 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.92□□□□□ -2.26
H3F3AP84243 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.92□□□□□ -2.26
H3F3AP84243 AC027119.1-201ENST00000440877 241 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 FTH1P25-201ENST00000447665 469 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AP000542.1-201ENST00000448473 371 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AL353752.1-201ENST00000454946 260 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.92□□□□□ -2.26
H3F3AP84243 RNU6-953P-201ENST00000459154 107 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AC130509.1-201ENST00000464158 433 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 HMGN1P7-201ENST00000491722 313 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.92□□□□□ -2.26
H3F3AP84243 AL136520.1-202ENST00000555494 763 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.92□□□□□ -2.26
H3F3AP84243 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.92□□□□□ -2.26
H3F3AP84243 AC006927.2-201ENST00000639256 389 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AL163152.1-201ENST00000642001 374 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 AC100821.1-201ENST00000523153 2479 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 MTND5P33-201ENST00000571250 1450 ntBASIC0.92□□□□□ -2.26
H3F3AP84243 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 SNORA62.1-201ENST00000364287 154 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 RNU6-487P-201ENST00000365430 104 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 FCF1P10-201ENST00000407590 479 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 Y_RNA.597-201ENST00000410463 100 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.91□□□□□ -2.26
H3F3AP84243 RPL21P111-201ENST00000418453 477 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.91□□□□□ -2.26
H3F3AP84243 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.91□□□□□ -2.26
H3F3AP84243 JTBP1-201ENST00000441314 247 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 MTND2P4-201ENST00000445034 1004 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 ZNF886P-201ENST00000450781 723 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
H3F3AP84243 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.91□□□□□ -2.26
H3F3AP84243 RNU6-1315P-201ENST00000517187 99 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 OR8K2P-201ENST00000524645 927 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.91□□□□□ -2.26
H3F3AP84243 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.91□□□□□ -2.26
H3F3AP84243 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.91□□□□□ -2.26
H3F3AP84243 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
H3F3AP84243 AC005786.1-201ENST00000588553 154 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 AC099785.1-201ENST00000605697 437 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 AC123767.1-202ENST00000620407 817 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 AC120349.3-201ENST00000624377 529 ntBASIC0.91□□□□□ -2.26
H3F3AP84243 RNU6-26P-201ENST00000383985 107 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 Y_RNA.578-201ENST00000390903 88 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 RNU2-23P-201ENST00000410545 195 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.9□□□□□ -2.27
H3F3AP84243 AC139712.2-201ENST00000424302 339 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 TOMM22P6-201ENST00000465035 409 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 RPL26P26-201ENST00000480251 434 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3AP84243 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.9□□□□□ -2.27
H3F3AP84243 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
H3F3AP84243 AC092325.1-201ENST00000566449 554 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 AC137800.2-201ENST00000574375 120 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 MIR5094-201ENST00000578766 85 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3AP84243 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.9□□□□□ -2.27
H3F3AP84243 AC063943.3-201ENST00000615562 356 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 DDX43P2-201ENST00000604753 1354 ntBASIC0.9□□□□□ -2.27
H3F3AP84243 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.9□□□□□ -2.27
H3F3AP84243 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3AP84243 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
H3F3AP84243 RNU6-622P-201ENST00000384272 103 ntBASIC0.89□□□□□ -2.27
H3F3AP84243 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms