Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC008121.1-201ENST00000603244 268 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 AC008962.1-201ENST00000605729 304 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 U3.45-201ENST00000607547 219 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 AC005046.1-201ENST00000608515 625 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 MIR8076-201ENST00000611401 83 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 AL159153.1-201ENST00000619688 317 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.28□□□□□ -1.72
CHMP4BP1P59074 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
CHMP4BP1P59074 U2.21-201ENST00000637295 81 ntBASIC4.28□□□□□ -1.72
CHMP4BP1P59074 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CHMP4BP1P59074 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CHMP4BP1P59074 MTND5P9-201ENST00000503854 1755 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.152-201ENST00000363578 100 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 MIR3074-201ENST00000384885 81 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 HMGB1P37-201ENST00000439613 609 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 SSXP4-201ENST00000451349 245 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 CYCSP35-201ENST00000451978 304 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 CEACAMP4-201ENST00000457676 421 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AL133162.1-201ENST00000463228 453 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 RN7SL271P-201ENST00000487601 295 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 HSPE1P20-201ENST00000538133 289 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC011602.1-201ENST00000546484 331 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC110741.2-201ENST00000605278 268 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC012531.5-201ENST00000611375 151 ntBASIC4.27□□□□□ -1.73
CHMP4BP1P59074 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CHMP4BP1P59074 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.19-201ENST00000362462 99 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.288-201ENST00000364854 92 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 MIR625-201ENST00000385047 85 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.592-201ENST00000410274 109 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 RPL21P38-201ENST00000418090 167 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 EIF4EP2-201ENST00000422816 654 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 AC098869.1-201ENST00000481627 292 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 RNU6-612P-201ENST00000516909 102 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 SNORA70.24-201ENST00000517233 118 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 AC068831.7-201ENST00000616954 363 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
CHMP4BP1P59074 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHMP4BP1P59074 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RNU6-778P-201ENST00000363269 103 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RNU6-770P-201ENST00000363929 105 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RNU6-336P-201ENST00000364891 107 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 Z98749.2-208ENST00000381646 500 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.477-201ENST00000384352 108 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RNU6-713P-201ENST00000384761 107 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 MIR218-2-201ENST00000385006 110 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 MIR888-201ENST00000401186 77 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC098614.2-201ENST00000426040 255 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC007560.1-201ENST00000426912 237 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 HMGB3P8-201ENST00000449709 577 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 LINC01399-202ENST00000458450 244 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RPL30P14-201ENST00000482744 348 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RPL32P34-201ENST00000486380 400 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC074250.1-201ENST00000511117 192 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 RN7SKP18-201ENST00000516005 275 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AC096577.2-201ENST00000611455 153 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 AL138825.1-201ENST00000618587 192 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.25□□□□□ -1.73
CHMP4BP1P59074 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CHMP4BP1P59074 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.14-201ENST00000362415 103 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RNU6-884P-201ENST00000363889 107 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RNA5SP51-201ENST00000364750 119 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms