Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AC091953.5-201ENST00000622919 233 ntBASIC2.8□□□□□ -1.96
ABCD3P28288 AL353743.1-202ENST00000431724 1695 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
ABCD3P28288 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.79□□□□□ -1.96
ABCD3P28288 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.79□□□□□ -1.96
ABCD3P28288 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ABCD3P28288 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ABCD3P28288 RNU6-336P-201ENST00000364891 107 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 Y_RNA.373-201ENST00000365600 103 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ABCD3P28288 RNU1-57P-201ENST00000384491 166 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ABCD3P28288 MIR887-201ENST00000401258 79 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AL138885.1-201ENST00000405921 675 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 RNU2-23P-201ENST00000410545 195 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 Y_RNA.615-201ENST00000410769 117 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.79□□□□□ -1.96
ABCD3P28288 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.79□□□□□ -1.96
ABCD3P28288 RPS15AP10-201ENST00000432472 382 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 MTCO2P3-201ENST00000442543 421 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 RPL7P12-201ENST00000446719 750 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 AC083904.1-201ENST00000487828 231 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AK3P2-201ENST00000507976 429 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AC009812.2-201ENST00000517657 457 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCD3P28288 MIR3200-201ENST00000580767 85 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AP000907.4-201ENST00000604143 237 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 AL160394.1-201ENST00000624765 724 ntBASIC2.79□□□□□ -1.96
ABCD3P28288 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
ABCD3P28288 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
ABCD3P28288 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 RNU6-827P-201ENST00000365553 106 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 RNU6-214P-201ENST00000384130 107 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 RNU6-220P-201ENST00000390919 107 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 SNORA48.5-201ENST00000391143 135 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.78□□□□□ -1.96
ABCD3P28288 AC245054.2-201ENST00000415639 319 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.78□□□□□ -1.96
ABCD3P28288 AC117440.1-201ENST00000474107 571 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 MTCYBP18-201ENST00000501056 747 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 SMURF2P1-201ENST00000514992 481 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 SNORA74D-201ENST00000516404 141 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 PSMA3P-201ENST00000555485 635 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.78□□□□□ -1.96
ABCD3P28288 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.78□□□□□ -1.96
ABCD3P28288 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.78□□□□□ -1.96
ABCD3P28288 AC107304.1-201ENST00000604229 296 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 AL020991.1-201ENST00000612314 373 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 uc_338.15-201ENST00000615470 191 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
ABCD3P28288 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.78□□□□□ -1.96
ABCD3P28288 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
ABCD3P28288 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ABCD3P28288 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ABCD3P28288 RNU6-428P-201ENST00000362942 107 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 RNU6-128P-201ENST00000383976 107 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 SNORA46-201ENST00000384762 135 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 CYCSP48-201ENST00000417124 323 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 EIF4EP4-201ENST00000424916 578 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.77□□□□□ -1.97
ABCD3P28288 AC104389.3-201ENST00000445629 235 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.77□□□□□ -1.97
ABCD3P28288 UQCRHP3-201ENST00000451503 251 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
ABCD3P28288 snoU13.14-201ENST00000459372 104 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 FAM206BP-201ENST00000510179 541 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.77□□□□□ -1.97
ABCD3P28288 AC091826.1-201ENST00000514065 313 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.77□□□□□ -1.97
ABCD3P28288 AP005597.4-201ENST00000526762 229 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 AC025423.5-201ENST00000550230 219 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.77□□□□□ -1.97
ABCD3P28288 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.77□□□□□ -1.97
ABCD3P28288 AC100830.2-201ENST00000581636 240 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.77□□□□□ -1.97
ABCD3P28288 AC009314.1-201ENST00000603871 304 ntBASIC2.77□□□□□ -1.97
ABCD3P28288 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ABCD3P28288 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ABCD3P28288 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
ABCD3P28288 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 RNU6-529P-201ENST00000363383 104 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 RNU6-1222P-201ENST00000384615 107 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 RPL21P75-201ENST00000396599 483 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 MIR450B-201ENST00000401182 78 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 RPL21P28-201ENST00000401418 483 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 RNU6-293P-201ENST00000411259 106 ntBASIC2.76□□□□□ -1.97
ABCD3P28288 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms