Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VARSP26640 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VARSP26640 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARSP26640 AL133383.2-201ENST00000622958 2336 ntBASIC4.77□□□□□ -1.65
VARSP26640 RNY1P11-201ENST00000363759 113 ntBASIC4.77□□□□□ -1.65
VARSP26640 RNU6-454P-201ENST00000364292 107 ntBASIC4.77□□□□□ -1.65
VARSP26640 RNU6-915P-201ENST00000364943 103 ntBASIC4.77□□□□□ -1.65
VARSP26640 SNORA72.4-201ENST00000384174 132 ntBASIC4.77□□□□□ -1.65
VARSP26640 Y_RNA.521-201ENST00000384560 114 ntBASIC4.77□□□□□ -1.65
VARSP26640 MT-TT-201ENST00000387460 66 ntBASIC4.77□□□□□ -1.65
VARSP26640 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.77□□□□□ -1.65
VARSP26640 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VARSP26640 HMGN2P21-201ENST00000447764 270 ntBASIC4.77□□□□□ -1.65
VARSP26640 SCARNA10-201ENST00000459255 330 ntBASIC4.77□□□□□ -1.65
VARSP26640 RN7SL385P-201ENST00000468873 276 ntBASIC4.77□□□□□ -1.65
VARSP26640 AC006517.1-201ENST00000480485 328 ntBASIC4.77□□□□□ -1.65
VARSP26640 RPS4XP13-201ENST00000483219 789 ntBASIC4.77□□□□□ -1.65
VARSP26640 RPL23AP70-201ENST00000483361 460 ntBASIC4.77□□□□□ -1.65
VARSP26640 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.77□□□□□ -1.65
VARSP26640 RNU6-107P-201ENST00000516643 102 ntBASIC4.77□□□□□ -1.65
VARSP26640 SNORA31.23-201ENST00000517219 133 ntBASIC4.77□□□□□ -1.65
VARSP26640 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.77□□□□□ -1.65
VARSP26640 MIR4284-201ENST00000578924 81 ntBASIC4.77□□□□□ -1.65
VARSP26640 MIR4737-201ENST00000583979 81 ntBASIC4.77□□□□□ -1.65
VARSP26640 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.77□□□□□ -1.65
VARSP26640 AC091979.2-201ENST00000607514 214 ntBASIC4.77□□□□□ -1.65
VARSP26640 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.77□□□□□ -1.65
VARSP26640 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.77□□□□□ -1.65
VARSP26640 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARSP26640 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARSP26640 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
VARSP26640 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VARSP26640 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VARSP26640 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VARSP26640 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VARSP26640 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 RNU6-235P-201ENST00000362644 107 ntBASIC4.76□□□□□ -1.65
VARSP26640 RNU6-335P-201ENST00000364563 113 ntBASIC4.76□□□□□ -1.65
VARSP26640 RPS16P5-201ENST00000406501 404 ntBASIC4.76□□□□□ -1.65
VARSP26640 CKS1BP6-201ENST00000424932 240 ntBASIC4.76□□□□□ -1.65
VARSP26640 AL732292.1-201ENST00000426692 226 ntBASIC4.76□□□□□ -1.65
VARSP26640 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.76□□□□□ -1.65
VARSP26640 RN7SL319P-201ENST00000480656 221 ntBASIC4.76□□□□□ -1.65
VARSP26640 AC140172.1-201ENST00000502928 141 ntBASIC4.76□□□□□ -1.65
VARSP26640 RN7SKP276-201ENST00000516242 268 ntBASIC4.76□□□□□ -1.65
VARSP26640 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.76□□□□□ -1.65
VARSP26640 TOMM20P2-201ENST00000540082 421 ntBASIC4.76□□□□□ -1.65
VARSP26640 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.76□□□□□ -1.65
VARSP26640 SNRPGP15-201ENST00000600149 222 ntBASIC4.76□□□□□ -1.65
VARSP26640 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 AL391903.3-201ENST00000612158 163 ntBASIC4.76□□□□□ -1.65
VARSP26640 AC019206.1-201ENST00000621938 425 ntBASIC4.76□□□□□ -1.65
VARSP26640 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
VARSP26640 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VARSP26640 AL133412.1-201ENST00000380194 2992 ntBASIC4.76□□□□□ -1.65
VARSP26640 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
VARSP26640 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VARSP26640 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
VARSP26640 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
VARSP26640 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.75□□□□□ -1.65
VARSP26640 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 RNU1-62P-201ENST00000362599 164 ntBASIC4.75□□□□□ -1.65
VARSP26640 RNVU1-6-201ENST00000364688 164 ntBASIC4.75□□□□□ -1.65
VARSP26640 AL355497.1-201ENST00000406262 551 ntBASIC4.75□□□□□ -1.65
VARSP26640 RN7SKP177-201ENST00000410567 355 ntBASIC4.75□□□□□ -1.65
VARSP26640 AL158823.1-201ENST00000418441 478 ntBASIC4.75□□□□□ -1.65
VARSP26640 TOMM22P1-201ENST00000418578 312 ntBASIC4.75□□□□□ -1.65
VARSP26640 AC092047.1-201ENST00000424997 240 ntBASIC4.75□□□□□ -1.65
VARSP26640 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.75□□□□□ -1.65
VARSP26640 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.75□□□□□ -1.65
VARSP26640 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.75□□□□□ -1.65
VARSP26640 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.75□□□□□ -1.65
VARSP26640 RN7SL517P-201ENST00000462240 305 ntBASIC4.75□□□□□ -1.65
VARSP26640 AC108751.2-201ENST00000469993 231 ntBASIC4.75□□□□□ -1.65
VARSP26640 RNU6-561P-201ENST00000516222 102 ntBASIC4.75□□□□□ -1.65
VARSP26640 RNU6-844P-201ENST00000517175 102 ntBASIC4.75□□□□□ -1.65
VARSP26640 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.75□□□□□ -1.65
VARSP26640 MIR378J-201ENST00000611988 109 ntBASIC4.75□□□□□ -1.65
VARSP26640 MIR6134-201ENST00000617606 109 ntBASIC4.75□□□□□ -1.65
VARSP26640 AL773545.4-201ENST00000637262 310 ntBASIC4.75□□□□□ -1.65
VARSP26640 U2.21-201ENST00000637295 81 ntBASIC4.75□□□□□ -1.65
VARSP26640 AL513478.4-201ENST00000641636 310 ntBASIC4.75□□□□□ -1.65
VARSP26640 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VARSP26640 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VARSP26640 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VARSP26640 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VARSP26640 AC006971.1-201ENST00000407916 4486 ntBASIC4.74□□□□□ -1.65
VARSP26640 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 RNU6-778P-201ENST00000363269 103 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms