Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL158032.1-201ENST00000605401 106 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AL138825.1-201ENST00000618587 192 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 MIR8062-201ENST00000621515 85 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A2P13942 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A2P13942 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
COL11A2P13942 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A2P13942 Y_RNA.39-201ENST00000362620 98 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RPS4XP7-201ENST00000406274 780 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNU2-3P-201ENST00000410144 191 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 HMGB1P9-201ENST00000429856 646 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A2P13942 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A2P13942 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A2P13942 RPS24P6-201ENST00000452670 400 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 PCMTD1P1-201ENST00000455560 355 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 SNORD127-201ENST00000458892 86 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RPL9P32-201ENST00000464118 620 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNA5SP24-201ENST00000516478 95 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 IGKV2D-23-201ENST00000518179 286 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 OR4H12P-201ENST00000556269 907 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AL591516.1-201ENST00000611326 274 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AC034102.8-201ENST00000615146 484 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AC138627.2-201ENST00000624202 601 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A2P13942 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
COL11A2P13942 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
COL11A2P13942 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 AL049555.1-201ENST00000562834 1933 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 Y_RNA.210-201ENST00000364161 110 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 Y_RNA.222-201ENST00000364264 102 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 RNU6-95P-201ENST00000384697 107 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 MIR1302-6-201ENST00000408466 90 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 RPL21P90-201ENST00000415692 466 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 AC003685.2-201ENST00000422795 395 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 AC093852.1-201ENST00000503587 266 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.46□□□□□ -1.86
COL11A2P13942 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.46□□□□□ -1.86
COL11A2P13942 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.46□□□□□ -1.86
COL11A2P13942 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.46□□□□□ -1.86
COL11A2P13942 Z98751.3-201ENST00000604447 521 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 MIR15A-201ENST00000607334 83 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 MIR6817-201ENST00000615588 66 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 AL589994.2-201ENST00000621124 579 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 AC015813.6-201ENST00000624409 5808 ntBASIC3.46□□□□□ -1.86
COL11A2P13942 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A2P13942 RNU6-874P-201ENST00000362390 105 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6-715P-201ENST00000365204 103 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6-596P-201ENST00000365395 98 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6-713P-201ENST00000384761 107 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 MIR1250-201ENST00000408098 113 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 MRPS18CP6-201ENST00000423587 223 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AL160275.3-201ENST00000423876 471 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RPL21P2-201ENST00000440049 481 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.45□□□□□ -1.86
COL11A2P13942 NEFMP1-201ENST00000443423 1006 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 FCF1P4-201ENST00000448326 183 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC003982.1-202ENST00000469928 248 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC008413.1-201ENST00000511864 177 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 SNORA25.11-201ENST00000515935 105 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6-911P-201ENST00000516523 104 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 RN7SKP82-201ENST00000516786 223 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC107016.2-201ENST00000547968 190 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.45□□□□□ -1.86
COL11A2P13942 AC006600.1-201ENST00000572529 153 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
COL11A2P13942 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AL355297.3-201ENST00000604082 446 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 AC006329.2-201ENST00000611491 394 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 TUG1_2.1-201ENST00000614234 87 ntBASIC3.45□□□□□ -1.86
COL11A2P13942 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A2P13942 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.45□□□□□ -1.86
COL11A2P13942 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A2P13942 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.45□□□□□ -1.86
COL11A2P13942 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.45□□□□□ -1.86
COL11A2P13942 RNU6-450P-201ENST00000364654 107 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 MIR887-201ENST00000401258 79 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.44□□□□□ -1.86
COL11A2P13942 RPL32P35-201ENST00000415214 394 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A2P13942 AL591704.1-201ENST00000432574 275 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.44□□□□□ -1.86
COL11A2P13942 AP000926.1-201ENST00000479573 241 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC069113.1-201ENST00000517763 267 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A2P13942 AP006587.4-201ENST00000526053 529 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A2P13942 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 SDR42E1P2-201ENST00000614861 481 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 SDR42E1P4-201ENST00000620894 481 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A2P13942 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A2P13942 ZNF658B-202ENST00000615961 3375 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms