Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC009248.2-201ENST00000619826 254 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AL031601.2-202ENST00000622650 282 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 AC092608.2-201ENST00000624427 218 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN1O95832 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN1O95832 MTND4P35-201ENST00000604257 1375 ntBASIC2.49□□□□□ -2.01
CLDN1O95832 RNU6-845P-201ENST00000362578 103 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6-266P-201ENST00000364225 107 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 Z98749.2-208ENST00000381646 500 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU1-73P-201ENST00000383971 164 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 Y_RNA.414-201ENST00000384011 101 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6-767P-201ENST00000384132 107 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6-1179P-201ENST00000384667 107 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN1O95832 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 NDUFS5P4-201ENST00000412983 318 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 HMGN2P30-201ENST00000423237 256 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 SAR1AP4-201ENST00000429225 591 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 HMGB1P9-201ENST00000429856 646 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL627311.1-201ENST00000431514 115 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL591806.2-201ENST00000433122 173 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 NDUFA5P4-201ENST00000436704 385 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN1O95832 USP9YP8-201ENST00000441913 500 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL078601.1-201ENST00000444542 271 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN1O95832 AC010099.1-201ENST00000455434 375 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC092798.1-201ENST00000458542 409 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC117503.1-201ENST00000472241 394 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RN7SL499P-201ENST00000481141 276 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC083904.1-201ENST00000487828 231 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN1O95832 RPS27AP10-201ENST00000496103 208 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 TRBVA-201ENST00000498804 316 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC108210.2-201ENST00000503681 201 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC114786.4-201ENST00000508771 728 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC098799.2-201ENST00000509466 868 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 MIR892C-201ENST00000516410 77 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 RNU6-572P-201ENST00000516724 80 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC027176.1-201ENST00000560204 514 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 UBE2V2P2-201ENST00000587677 504 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC011712.1-201ENST00000588959 234 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AL645944.1-201ENST00000603857 493 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 NUTF2P8-201ENST00000604593 363 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN1O95832 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN1O95832 AC025253.1-201ENST00000613623 543 ntBASIC2.48□□□□□ -2.01
CLDN1O95832 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN1O95832 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN1O95832 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN1O95832 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CLDN1O95832 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
CLDN1O95832 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC091564.4-201ENST00000533934 2194 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN1O95832 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN1O95832 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN1O95832 Y_RNA.212-201ENST00000364177 102 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 RNU5E-4P-201ENST00000364931 120 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 RNU6-831P-201ENST00000384548 107 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLDN1O95832 RNU6-510P-201ENST00000391239 108 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 RPS4XP7-201ENST00000406274 780 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 MIR1289-2-201ENST00000408360 111 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 RNU2-41P-201ENST00000410991 178 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC009963.1-201ENST00000417265 157 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 PDCL2P1-201ENST00000419302 352 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN1O95832 AL583843.1-201ENST00000456070 346 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC091951.2-201ENST00000500762 203 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 SNORA19.2-201ENST00000516013 114 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 RNU6-864P-201ENST00000516256 108 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.47□□□□□ -2.01
CLDN1O95832 IGKV3-31-201ENST00000523109 329 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN1O95832 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN1O95832 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN1O95832 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.47□□□□□ -2.01
CLDN1O95832 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN1O95832 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN1O95832 AC005261.5-201ENST00000596280 355 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AC002044.1-201ENST00000606707 158 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 AL359198.2-201ENST00000611836 194 ntBASIC2.47□□□□□ -2.01
CLDN1O95832 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN1O95832 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN1O95832 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN1O95832 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN1O95832 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN1O95832 RNU6-254P-201ENST00000363377 107 ntBASIC2.46□□□□□ -2.02
CLDN1O95832 Y_RNA.135-201ENST00000363439 95 ntBASIC2.46□□□□□ -2.02
CLDN1O95832 SNORD113-7-201ENST00000363762 77 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms