Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SIX6O95475 CYP3A137P-201ENST00000562436 69 ntBASIC0.29□□□□□ -2.36
SIX6O95475 MIR4524B-201ENST00000581569 115 ntBASIC0.29□□□□□ -2.36
SIX6O95475 MIR4637-201ENST00000582405 84 ntBASIC0.29□□□□□ -2.36
SIX6O95475 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.29□□□□□ -2.36
SIX6O95475 BNIP3P31-201ENST00000604515 566 ntBASIC0.29□□□□□ -2.36
SIX6O95475 AC090578.1-201ENST00000604955 591 ntBASIC0.29□□□□□ -2.36
SIX6O95475 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SIX6O95475 AC130324.3-201ENST00000614165 542 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RMST_4.1-201ENST00000616886 107 ntBASIC0.29□□□□□ -2.36
SIX6O95475 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.29□□□□□ -2.36
SIX6O95475 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SIX6O95475 AC245060.5-201ENST00000610778 3293 ntBASIC0.28□□□□□ -2.36
SIX6O95475 RNU6-655P-201ENST00000362858 107 ntBASIC0.28□□□□□ -2.36
SIX6O95475 RNU6-1066P-201ENST00000363573 105 ntBASIC0.28□□□□□ -2.36
SIX6O95475 RNU6-188P-201ENST00000364207 107 ntBASIC0.28□□□□□ -2.36
SIX6O95475 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.28□□□□□ -2.36
SIX6O95475 AL356776.1-201ENST00000406574 447 ntBASIC0.28□□□□□ -2.36
SIX6O95475 FTH1P15-201ENST00000406984 280 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AP000275.1-201ENST00000411943 390 ntBASIC0.28□□□□□ -2.36
SIX6O95475 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.28□□□□□ -2.36
SIX6O95475 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 BX119904.4-201ENST00000424402 301 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AC098934.3-201ENST00000430450 190 ntBASIC0.28□□□□□ -2.36
SIX6O95475 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AC092628.1-201ENST00000436250 252 ntBASIC0.28□□□□□ -2.36
SIX6O95475 BRK1P2-201ENST00000442875 223 ntBASIC0.28□□□□□ -2.36
SIX6O95475 MTCO2P25-201ENST00000447065 681 ntBASIC0.28□□□□□ -2.36
SIX6O95475 Z73417.1-201ENST00000447373 778 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 MTND1P9-201ENST00000453775 944 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AC097473.1-201ENST00000508142 408 ntBASIC0.28□□□□□ -2.36
SIX6O95475 RNU6-714P-201ENST00000516963 103 ntBASIC0.28□□□□□ -2.36
SIX6O95475 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.28□□□□□ -2.36
SIX6O95475 AC087897.1-201ENST00000550134 156 ntBASIC0.28□□□□□ -2.36
SIX6O95475 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.28□□□□□ -2.36
SIX6O95475 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AC012414.2-201ENST00000559474 187 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.28□□□□□ -2.36
SIX6O95475 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.28□□□□□ -2.36
SIX6O95475 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.28□□□□□ -2.36
SIX6O95475 AC022432.1-201ENST00000595739 310 ntBASIC0.28□□□□□ -2.36
SIX6O95475 DPPA3P3-201ENST00000603842 430 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.28□□□□□ -2.36
SIX6O95475 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.28□□□□□ -2.36
SIX6O95475 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
SIX6O95475 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.28□□□□□ -2.36
SIX6O95475 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
SIX6O95475 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SIX6O95475 RNU6-223P-201ENST00000362830 107 ntBASIC0.27□□□□□ -2.37
SIX6O95475 SNORD56.4-201ENST00000363883 71 ntBASIC0.27□□□□□ -2.37
SIX6O95475 RNU6-359P-201ENST00000365466 108 ntBASIC0.27□□□□□ -2.37
SIX6O95475 SUGT1P1-201ENST00000379514 476 ntBASIC0.27□□□□□ -2.37
SIX6O95475 RNU6-110P-201ENST00000384508 104 ntBASIC0.27□□□□□ -2.37
SIX6O95475 MIR29B2-201ENST00000385055 81 ntBASIC0.27□□□□□ -2.37
SIX6O95475 AC063976.4-201ENST00000421971 163 ntBASIC0.27□□□□□ -2.37
SIX6O95475 MTCO3P45-201ENST00000443036 613 ntBASIC0.27□□□□□ -2.37
SIX6O95475 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.27□□□□□ -2.37
SIX6O95475 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
SIX6O95475 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.27□□□□□ -2.37
SIX6O95475 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 AC108729.3-201ENST00000513484 108 ntBASIC0.27□□□□□ -2.37
SIX6O95475 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.27□□□□□ -2.37
SIX6O95475 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.27□□□□□ -2.37
SIX6O95475 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 AC006518.2-201ENST00000542513 940 ntBASIC0.27□□□□□ -2.37
SIX6O95475 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 AC025423.5-201ENST00000550230 219 ntBASIC0.27□□□□□ -2.37
SIX6O95475 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.27□□□□□ -2.37
SIX6O95475 VN1R83P-201ENST00000595685 445 ntBASIC0.27□□□□□ -2.37
SIX6O95475 AL590229.1-201ENST00000603497 542 ntBASIC0.27□□□□□ -2.37
SIX6O95475 AC107304.1-201ENST00000604229 296 ntBASIC0.27□□□□□ -2.37
SIX6O95475 RNA5SP347-201ENST00000362445 119 ntBASIC0.26□□□□□ -2.37
SIX6O95475 AC092427.1-201ENST00000439177 601 ntBASIC0.26□□□□□ -2.37
SIX6O95475 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.26□□□□□ -2.37
SIX6O95475 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.26□□□□□ -2.37
SIX6O95475 TRMT112P2-201ENST00000512910 132 ntBASIC0.26□□□□□ -2.37
SIX6O95475 AC093012.1-202ENST00000549403 582 ntBASIC0.26□□□□□ -2.37
SIX6O95475 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.26□□□□□ -2.37
SIX6O95475 AC008015.1-201ENST00000555505 465 ntBASIC0.26□□□□□ -2.37
SIX6O95475 AC137800.2-201ENST00000574375 120 ntBASIC0.26□□□□□ -2.37
SIX6O95475 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.26□□□□□ -2.37
SIX6O95475 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.26□□□□□ -2.37
SIX6O95475 AC123767.1-202ENST00000620407 817 ntBASIC0.26□□□□□ -2.37
SIX6O95475 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
SIX6O95475 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
SIX6O95475 LINC02555-201ENST00000563933 1951 ntBASIC0.26□□□□□ -2.37
SIX6O95475 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SIX6O95475 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
SIX6O95475 RNY1P10-201ENST00000363268 113 ntBASIC0.25□□□□□ -2.37
SIX6O95475 Y_RNA.124-201ENST00000363339 93 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNU6-1210P-201ENST00000363775 107 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNU4-12P-201ENST00000365233 139 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms