Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AL139276.1-201ENST00000311910 1001 ntBASIC2.43□□□□□ -2.02
SIX3O95343 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
SIX3O95343 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
SIX3O95343 SNORD37.1-201ENST00000390968 65 ntBASIC2.43□□□□□ -2.02
SIX3O95343 SNORD70.1-201ENST00000391007 85 ntBASIC2.43□□□□□ -2.02
SIX3O95343 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX3O95343 RNU6-607P-201ENST00000411283 108 ntBASIC2.43□□□□□ -2.02
SIX3O95343 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
SIX3O95343 OR9R1P-201ENST00000412200 877 ntBASIC2.43□□□□□ -2.02
SIX3O95343 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX3O95343 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
SIX3O95343 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX3O95343 AL451074.3-201ENST00000437709 472 ntBASIC2.43□□□□□ -2.02
SIX3O95343 RPS12P2-201ENST00000439728 269 ntBASIC2.43□□□□□ -2.02
SIX3O95343 PRPS1P1-201ENST00000445305 876 ntBASIC2.43□□□□□ -2.02
SIX3O95343 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
SIX3O95343 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.43□□□□□ -2.02
SIX3O95343 AC008526.1-201ENST00000509149 338 ntBASIC2.43□□□□□ -2.02
SIX3O95343 MTCO3P7-201ENST00000510008 774 ntBASIC2.43□□□□□ -2.02
SIX3O95343 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX3O95343 AC079140.3-201ENST00000511111 550 ntBASIC2.43□□□□□ -2.02
SIX3O95343 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SIX3O95343 PIGPP4-201ENST00000584447 307 ntBASIC2.43□□□□□ -2.02
SIX3O95343 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.43□□□□□ -2.02
SIX3O95343 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX3O95343 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
SIX3O95343 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SIX3O95343 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
SIX3O95343 U3.12-201ENST00000364498 214 ntBASIC2.42□□□□□ -2.02
SIX3O95343 Y_RNA.324-201ENST00000365165 102 ntBASIC2.42□□□□□ -2.02
SIX3O95343 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIX3O95343 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SIX3O95343 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX3O95343 AC074117.2-201ENST00000417130 397 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AL161788.1-201ENST00000441805 169 ntBASIC2.42□□□□□ -2.02
SIX3O95343 GMFBP1-201ENST00000467831 427 ntBASIC2.42□□□□□ -2.02
SIX3O95343 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
SIX3O95343 AC092436.1-201ENST00000506450 503 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AC079140.5-201ENST00000507882 310 ntBASIC2.42□□□□□ -2.02
SIX3O95343 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
SIX3O95343 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
SIX3O95343 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX3O95343 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AC136619.2-201ENST00000563361 631 ntBASIC2.42□□□□□ -2.02
SIX3O95343 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX3O95343 AC012507.3-201ENST00000603556 477 ntBASIC2.42□□□□□ -2.02
SIX3O95343 RMST_4.1-201ENST00000616886 107 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AC007792.1-201ENST00000623023 402 ntBASIC2.42□□□□□ -2.02
SIX3O95343 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.42□□□□□ -2.02
SIX3O95343 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIX3O95343 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX3O95343 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SIX3O95343 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SIX3O95343 Y_RNA.1-201ENST00000352915 104 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-37P-201ENST00000362692 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-1010P-201ENST00000362757 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-78P-201ENST00000362897 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-11P-201ENST00000364234 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-487P-201ENST00000365430 104 ntBASIC2.41□□□□□ -2.02
SIX3O95343 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-25P-201ENST00000383873 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-1-201ENST00000383898 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-48P-201ENST00000384161 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-36P-201ENST00000384172 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-4P-201ENST00000384205 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-5P-201ENST00000384238 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-3P-201ENST00000384314 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-517P-201ENST00000384362 110 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-16P-201ENST00000384385 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-15P-201ENST00000384534 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-2-201ENST00000384627 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-29P-201ENST00000384637 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-9-201ENST00000384776 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-33P-201ENST00000384793 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 MIR186-201ENST00000384988 86 ntBASIC2.41□□□□□ -2.02
SIX3O95343 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX3O95343 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX3O95343 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.41□□□□□ -2.02
SIX3O95343 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX3O95343 AL118520.1-201ENST00000450770 291 ntBASIC2.41□□□□□ -2.02
SIX3O95343 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX3O95343 SCARNA18-201ENST00000459004 134 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RPL30P12-201ENST00000474666 353 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNA5SP320-201ENST00000516263 124 ntBASIC2.41□□□□□ -2.02
SIX3O95343 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.41□□□□□ -2.02
SIX3O95343 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SIX3O95343 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.41□□□□□ -2.02
SIX3O95343 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.41□□□□□ -2.02
SIX3O95343 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX3O95343 MTND1P15-201ENST00000579262 949 ntBASIC2.41□□□□□ -2.02
SIX3O95343 LRRC37A5P-203ENST00000580181 585 ntBASIC2.41□□□□□ -2.02
SIX3O95343 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX3O95343 AL121917.1-203ENST00000605534 577 ntBASIC2.41□□□□□ -2.02
SIX3O95343 RNU6-6P-201ENST00000606623 107 ntBASIC2.41□□□□□ -2.02
SIX3O95343 AL354950.2-201ENST00000617939 290 ntBASIC2.41□□□□□ -2.02
SIX3O95343 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX3O95343 AC243829.7-201ENST00000633081 225 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms