Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-6P-201ENST00000606623 107 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM13O60858 AL360181.4-201ENST00000621752 134 ntBASIC3.8□□□□□ -1.8
TRIM13O60858 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM13O60858 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM13O60858 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM13O60858 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM13O60858 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
TRIM13O60858 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM13O60858 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 UBE2WP1-201ENST00000362030 340 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 RNU6-153P-201ENST00000364422 104 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 Y_RNA.273-201ENST00000364703 102 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 Y_RNA.400-201ENST00000383963 111 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 Y_RNA.488-201ENST00000384403 102 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM13O60858 MIR1183-201ENST00000408856 89 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AL035461.1-201ENST00000421490 332 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC008267.6-201ENST00000441664 139 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM13O60858 RPS26P21-201ENST00000475397 348 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC105137.1-201ENST00000484355 562 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 RPS15AP34-201ENST00000487776 387 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 RPL30P1-201ENST00000488676 339 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 RNU6-612P-201ENST00000516909 102 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM13O60858 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM13O60858 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM13O60858 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM13O60858 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
TRIM13O60858 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.79□□□□□ -1.8
TRIM13O60858 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM13O60858 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM13O60858 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 DEFB108F-201ENST00000344638 222 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 RNA5SP443-201ENST00000363083 132 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AL138878.1-201ENST00000405131 347 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AL451062.2-201ENST00000427515 271 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 RPL21P40-201ENST00000428586 483 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AL592045.1-201ENST00000429867 352 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM13O60858 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM13O60858 RPS29P27-201ENST00000463711 170 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM13O60858 RPS27P26-201ENST00000494583 239 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC231760.1-201ENST00000498002 260 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 HMGB1P22-201ENST00000505315 124 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM13O60858 RNU6-1315P-201ENST00000517187 99 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AP003730.1-201ENST00000524605 285 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC103996.1-201ENST00000555468 102 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM13O60858 AP000346.3-201ENST00000622821 210 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 Z99571.1-201ENST00000636677 394 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
TRIM13O60858 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM13O60858 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.78□□□□□ -1.81
TRIM13O60858 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
TRIM13O60858 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TRIM13O60858 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TRIM13O60858 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM13O60858 RNU6-384P-201ENST00000364900 104 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 Y_RNA.308-201ENST00000365043 101 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 RNU6-1289P-201ENST00000384431 106 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 RNU4-30P-201ENST00000410245 143 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AL513331.1-201ENST00000411908 397 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 RHEBP3-201ENST00000411920 351 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM13O60858 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM13O60858 TBCAP1-201ENST00000436520 327 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 HSPD1P21-201ENST00000436541 245 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AC007395.1-201ENST00000451333 677 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 SSXP4-201ENST00000451349 245 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 snoU13.24-201ENST00000458998 104 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AC091959.1-201ENST00000495857 238 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM13O60858 APOOP4-201ENST00000513530 597 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 RNU6-919P-201ENST00000516731 104 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms