Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GFRA3O60609 AL159152.1-201ENST00000635019 2587 ntBASIC4.73□□□□□ -1.65
GFRA3O60609 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA3O60609 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
GFRA3O60609 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 RNU6-414P-201ENST00000363705 104 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 SNORA18.3-201ENST00000384122 132 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 U3.37-201ENST00000408528 213 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 RN7SKP61-201ENST00000410642 295 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 AC007064.1-201ENST00000412238 351 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA3O60609 AC012306.1-201ENST00000423267 114 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA3O60609 RPS29P9-201ENST00000440360 171 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 AC107626.1-201ENST00000471084 183 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA3O60609 AC006160.2-201ENST00000637708 154 ntBASIC4.72□□□□□ -1.65
GFRA3O60609 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
GFRA3O60609 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA3O60609 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
GFRA3O60609 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA3O60609 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
GFRA3O60609 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.65
GFRA3O60609 AC103988.1-201ENST00000566382 2177 ntBASIC4.71□□□□□ -1.65
GFRA3O60609 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
GFRA3O60609 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
GFRA3O60609 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.71□□□□□ -1.66
GFRA3O60609 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA3O60609 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA3O60609 RNU4-36P-201ENST00000364294 144 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 RNU1-140P-201ENST00000365040 165 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 RNU6-487P-201ENST00000365430 104 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 MIR589-201ENST00000385238 99 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 NDUFB4P4-201ENST00000404822 243 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 AC007969.2-201ENST00000441891 191 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA3O60609 SNRPGP7-201ENST00000469016 106 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 AC097462.1-201ENST00000514125 324 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 RNA5SP392-201ENST00000516905 112 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA3O60609 AC020895.1-201ENST00000595362 272 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 AL049861.1-201ENST00000603130 150 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 AP003357.1-201ENST00000604497 148 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 CR392039.5-201ENST00000623201 510 ntBASIC4.71□□□□□ -1.66
GFRA3O60609 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.71□□□□□ -1.66
GFRA3O60609 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA3O60609 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.71□□□□□ -1.66
GFRA3O60609 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA3O60609 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA3O60609 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.71□□□□□ -1.66
GFRA3O60609 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
GFRA3O60609 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA3O60609 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA3O60609 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.7□□□□□ -1.66
GFRA3O60609 AC092681.1-201ENST00000297369 291 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 RNA5SP366-201ENST00000365454 123 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 SNORD38C-201ENST00000384381 69 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 AL117342.1-201ENST00000404861 406 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 RNU2-70P-201ENST00000410718 179 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 AC234781.4-201ENST00000419384 244 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 EIF4EP4-201ENST00000424916 578 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 AL117339.2-201ENST00000430475 180 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.7□□□□□ -1.66
GFRA3O60609 SCARNA10-201ENST00000459255 330 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 HSPE1P6-201ENST00000479457 291 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.7□□□□□ -1.66
GFRA3O60609 RNA5SP154-201ENST00000516193 111 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 AL356575.1-201ENST00000603008 283 ntBASIC4.7□□□□□ -1.66
GFRA3O60609 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
GFRA3O60609 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
GFRA3O60609 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA3O60609 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 AC073073.2-201ENST00000609827 2578 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.69□□□□□ -1.66
GFRA3O60609 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
GFRA3O60609 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms