Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC093899.1-201ENST00000457984 376 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 RNU6-953P-201ENST00000459154 107 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.2□□□□□ -2.22
UBFD1O14562 MED28P2-201ENST00000475771 317 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.2□□□□□ -2.22
UBFD1O14562 ATP5EP1-201ENST00000510257 156 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 RNU2-53P-201ENST00000516257 147 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.2□□□□□ -2.22
UBFD1O14562 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.2□□□□□ -2.22
UBFD1O14562 DUXAP5-201ENST00000529668 529 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC023050.2-201ENST00000544968 387 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.2□□□□□ -2.22
UBFD1O14562 AL157871.3-201ENST00000557231 293 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC092325.1-201ENST00000566449 554 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC026271.5-201ENST00000577873 130 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 MIR1273C-201ENST00000578669 77 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 MIR3146-201ENST00000580367 79 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.2□□□□□ -2.22
UBFD1O14562 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.2□□□□□ -2.22
UBFD1O14562 AP001981.2-201ENST00000603241 418 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 MIR15A-201ENST00000607334 83 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC098614.4-201ENST00000607601 462 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 Z82243.1-201ENST00000609432 473 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AL355816.2-201ENST00000610049 647 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AC004908.3-201ENST00000610248 625 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 AP000560.1-201ENST00000624150 1937 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 MTND4P16-201ENST00000466108 1367 ntBASIC1.2□□□□□ -2.22
UBFD1O14562 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBFD1O14562 SNORD3E-201ENST00000362899 217 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 RNU6-511P-201ENST00000363496 107 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.19□□□□□ -2.22
UBFD1O14562 ELOCP17-201ENST00000414751 326 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 ELOCP9-201ENST00000418624 239 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.19□□□□□ -2.22
UBFD1O14562 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.19□□□□□ -2.22
UBFD1O14562 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.19□□□□□ -2.22
UBFD1O14562 AL606517.1-201ENST00000446914 387 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 EXOSC3P1-201ENST00000448649 500 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC134050.1-201ENST00000495088 933 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.19□□□□□ -2.22
UBFD1O14562 AP005660.1-201ENST00000522972 293 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC011604.1-201ENST00000545978 196 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC084364.2-201ENST00000546924 395 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.19□□□□□ -2.22
UBFD1O14562 AC022254.1-201ENST00000567857 235 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.19□□□□□ -2.22
UBFD1O14562 WISP1-OT1-201ENST00000602893 642 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC073410.2-201ENST00000603240 332 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC021646.1-201ENST00000605469 484 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC013244.3-201ENST00000605614 388 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.19□□□□□ -2.22
UBFD1O14562 AL132822.1-201ENST00000617063 513 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AP000484.1-201ENST00000620067 1252 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 AC092192.1-201ENST00000633154 1018 ntBASIC1.19□□□□□ -2.22
UBFD1O14562 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 MTND5P35-201ENST00000557537 1720 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 Y_RNA.33-201ENST00000362591 102 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU6-944P-201ENST00000364023 107 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU4-68P-201ENST00000364314 141 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU6-1164P-201ENST00000364428 107 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU5E-6P-201ENST00000365574 115 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU6-946P-201ENST00000383878 107 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
UBFD1O14562 RNU11-3P-201ENST00000391111 133 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNA5SP212-201ENST00000391223 107 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 RNU2-32P-201ENST00000411193 191 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 FCF1P6-201ENST00000456841 595 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 PRELID3BP1-201ENST00000457142 540 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC119751.4-201ENST00000507498 357 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 Y_RNA.689-201ENST00000516589 107 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.18□□□□□ -2.22
UBFD1O14562 MIR4713-201ENST00000582691 75 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 MIR4307-201ENST00000582802 84 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.18□□□□□ -2.22
UBFD1O14562 BNIP3P30-201ENST00000601184 574 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 AL592221.1-201ENST00000605266 382 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.18□□□□□ -2.22
UBFD1O14562 AL139418.1-201ENST00000613613 177 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.18□□□□□ -2.22
UBFD1O14562 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
UBFD1O14562 AC092104.1-201ENST00000497346 1441 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 RNU6-1010P-201ENST00000362757 107 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 RNY4P16-201ENST00000364768 94 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 RNU6-843P-201ENST00000384454 104 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 RNA5SP501-201ENST00000410990 112 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 UBE2V1P10-201ENST00000414685 269 ntBASIC1.17□□□□□ -2.22
UBFD1O14562 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms