Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM38O00635 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM38O00635 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM38O00635 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM38O00635 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 MTND5P30-201ENST00000452896 1731 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM38O00635 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM38O00635 Y_RNA.153-201ENST00000363615 91 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM38O00635 SNORA75B-201ENST00000384053 137 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 RNU6-434P-201ENST00000384376 107 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 Y_RNA.574-201ENST00000384766 95 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 MIR578-201ENST00000384828 96 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 Y_RNA.646-201ENST00000410980 101 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 ARL5AP1-201ENST00000418991 388 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 BPY2DP-201ENST00000422208 265 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 RNA5SP454-201ENST00000517231 127 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 MTND4P7-201ENST00000523876 130 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 MIR4782-201ENST00000577987 79 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
TRIM38O00635 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM38O00635 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRIM38O00635 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM38O00635 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM38O00635 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
TRIM38O00635 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM38O00635 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM38O00635 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM38O00635 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-799P-201ENST00000363567 107 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 Y_RNA.257-201ENST00000364596 102 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 Y_RNA.307-201ENST00000365022 117 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-1040P-201ENST00000383974 107 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-45P-201ENST00000384471 107 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-393P-201ENST00000384475 107 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-658P-201ENST00000384606 106 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM38O00635 AL353621.1-201ENST00000418219 243 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 AC008267.5-201ENST00000424928 265 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RPL21P40-201ENST00000428586 483 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 AC096644.2-201ENST00000429278 159 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM38O00635 RPS15AP27-201ENST00000449183 343 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 SCARNA18-201ENST00000459004 134 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RN7SL504P-201ENST00000494496 287 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 Y_RNA.668-201ENST00000516233 93 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-635P-201ENST00000516651 102 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 RNU6-1183P-201ENST00000517054 60 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM38O00635 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM38O00635 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 MIR5690-201ENST00000583739 73 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 MIR3672-201ENST00000584290 82 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 AC005357.1-201ENST00000588399 301 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM38O00635 AC098657.3-201ENST00000620434 263 ntBASIC3.38□□□□□ -1.87
TRIM38O00635 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM38O00635 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM38O00635 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TRIM38O00635 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM38O00635 RNU6-82P-201ENST00000363970 107 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 RNA5SP139-201ENST00000364340 117 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 Y_RNA.364-201ENST00000365532 101 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 SNORA48.5-201ENST00000391143 135 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 Y_RNA.623-201ENST00000411128 95 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 RPL21P90-201ENST00000415692 466 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AL365496.1-201ENST00000426885 215 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AL627311.1-201ENST00000431514 115 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM38O00635 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 CENPBD1P1-201ENST00000464061 469 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM38O00635 RN7SL594P-201ENST00000470590 287 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 RPS27P27-201ENST00000498779 255 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AC110794.1-201ENST00000505816 425 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 RPL39P5-202ENST00000512505 151 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 HMGN2P15-201ENST00000585707 270 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM38O00635 AC018889.1-201ENST00000605372 397 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms