Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC079781.2-201ENST00000446424 169 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC003071.1-201ENST00000451219 789 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU7-63P-201ENST00000459054 62 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-261P-201ENST00000459506 102 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 EIF4EP3-201ENST00000498782 656 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 MRPS36P2-201ENST00000512569 299 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.693-201ENST00000516641 110 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 SNORA31.18-201ENST00000517043 134 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1315P-201ENST00000517187 99 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 HIF1AP1-201ENST00000553642 175 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 HMGB1P33-201ENST00000563485 527 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC005498.1-201ENST00000592125 465 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC107304.1-201ENST00000604229 296 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC024940.5-201ENST00000622889 474 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-451P-201ENST00000362921 107 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-996P-201ENST00000365438 107 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1127P-201ENST00000384580 107 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-658P-201ENST00000384606 106 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-648P-201ENST00000410190 107 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RPL21P90-201ENST00000415692 466 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC016831.2-201ENST00000417179 352 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 HMGB1P27-201ENST00000431429 603 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 UBE2V1P8-201ENST00000437166 265 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU7-180P-201ENST00000459240 63 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 snoU109.2-201ENST00000459316 135 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC008549.1-201ENST00000512900 643 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1178P-201ENST00000516674 107 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-572P-201ENST00000516724 80 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 SNORA31.19-201ENST00000517079 126 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 MTND4LP26-201ENST00000518144 282 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AP002770.2-201ENST00000543613 532 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 ADI1P3-201ENST00000549509 470 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AL157871.3-201ENST00000557231 293 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 MIR3945-201ENST00000581853 98 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC012507.3-201ENST00000603556 477 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AL356280.1-201ENST00000603614 379 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC123912.5-201ENST00000605470 343 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 HMGB1P24-202ENST00000615653 685 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC026585.1-201ENST00000619582 524 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 DUXAP9-208ENST00000622815 614 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AP003400.5-201ENST00000624827 617 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 MIR4275-201ENST00000636486 87 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 AC022336.2-201ENST00000568966 2538 ntBASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TRIM49D1C9J1S8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MTND4P14-201ENST00000435799 1354 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MTND5P17-201ENST00000418405 1603 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1287P-201ENST00000362914 107 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.167-201ENST00000363735 109 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-371P-201ENST00000364283 108 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.378-201ENST00000365652 113 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.450-201ENST00000384198 113 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-166P-201ENST00000384371 107 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1060P-201ENST00000384664 107 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MIR524-201ENST00000385242 87 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 SNORA3.2-201ENST00000408221 125 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU2-68P-201ENST00000410878 191 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MTCO1P20-201ENST00000425366 358 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AL596276.1-201ENST00000434465 418 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 PSPHP1-201ENST00000450062 261 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU7-26P-201ENST00000458980 63 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 RNU7-182P-201ENST00000459009 62 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms