Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3AQ9Y6K1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RNA5SP191-201ENST00000362585 102 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 snoU2_19.4-201ENST00000364329 80 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 Y_RNA.230-201ENST00000364348 109 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RNY1P7-201ENST00000384743 110 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 COX6B1P7-201ENST00000430845 235 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 HSPE1P21-201ENST00000438283 308 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 AC016831.4-201ENST00000438302 307 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RPL23AP14-201ENST00000468281 468 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 AC139453.2-201ENST00000487255 133 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 AC004832.5-201ENST00000608677 401 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 AL442128.1-201ENST00000615151 90 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MIR6134-201ENST00000617606 109 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MIR6844-201ENST00000637122 62 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 AC125257.1-201ENST00000560400 2930 ntBASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3AQ9Y6K1 MTND5P18-201ENST00000445624 1801 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 MIR494-201ENST00000349529 81 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-942P-201ENST00000363002 107 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 SNORD115-32-201ENST00000364079 82 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 Y_RNA.244-201ENST00000364484 109 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 UBBP2-201ENST00000376781 231 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-1124P-201ENST00000384169 107 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-820P-201ENST00000384273 107 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-768P-201ENST00000384683 107 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 MIR298-201ENST00000401212 88 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RPS3AP1-201ENST00000413190 320 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 BPY2DP-201ENST00000422208 265 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 EIF4HP2-201ENST00000424380 563 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AL714022.1-201ENST00000439897 151 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AC096638.1-201ENST00000444678 216 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RPS23P1-201ENST00000491662 432 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-1114P-201ENST00000516022 107 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-966P-201ENST00000516479 104 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 RNA5SP395-201ENST00000516567 118 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AP003730.1-201ENST00000524605 285 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 CYCSP40-201ENST00000575927 294 ntBASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DNMT3AQ9Y6K1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-103P-201ENST00000363686 107 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-884P-201ENST00000363889 107 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-1286P-201ENST00000383871 107 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RNU6-541P-201ENST00000384709 110 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 MIR32-201ENST00000384965 70 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AL590762.2-201ENST00000395798 571 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 MIR937-201ENST00000401271 86 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RN7SKP267-201ENST00000410381 285 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RN7SKP177-201ENST00000410567 355 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AL353705.4-201ENST00000449661 238 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RNA5SP103-201ENST00000459503 118 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 MIR4270-201ENST00000581799 70 ntBASIC4.68□□□□□ -1.66
DNMT3AQ9Y6K1 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms