Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL049861.1-201ENST00000603130 150 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 SNORD115-40-201ENST00000606510 82 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 BMS1P21-201ENST00000634565 365 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 AL356489.2-201ENST00000566968 3528 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 AL589743.1-201ENST00000551932 2712 ntBASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
PCDHGA4Q9Y5G9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 AL590004.2-201ENST00000404787 371 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 EIF4HP2-201ENST00000424380 563 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 CALM2P4-201ENST00000430810 426 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 PTMAP3-201ENST00000447474 330 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RN7SL97P-201ENST00000486780 299 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 SNORA31.8-201ENST00000516327 108 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-109P-201ENST00000516364 107 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-184P-201ENST00000516514 107 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-158P-201ENST00000517104 100 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR4646-201ENST00000580775 63 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 AL451007.1-201ENST00000595491 289 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 PCGEM1.1-201ENST00000613431 131 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 Y_RNA.818-201ENST00000618813 71 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 AC007256.1-201ENST00000392253 2765 ntBASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA4Q9Y5G9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC063976.2-201ENST00000425667 3556 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 SNORA63.5-201ENST00000363548 123 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 SNORA70.6-201ENST00000383934 134 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 RNA5SP225-201ENST00000410874 135 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC244098.2-201ENST00000422068 99 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 MIR4436B2-201ENST00000581415 91 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 MIR4436B1-201ENST00000583272 91 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 VN1R85P-201ENST00000601587 426 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC097639.2-201ENST00000603159 172 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC000068.2-201ENST00000608816 460 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC006133.1-201ENST00000617106 264 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 MALAT1.1-201ENST00000618249 95 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 AC006065.5-201ENST00000623427 349 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 Z95331.1-201ENST00000623075 23112 ntBASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA4Q9Y5G9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU6-228P-201ENST00000362700 106 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 Y_RNA.634-201ENST00000364811 113 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RNA5SP223-201ENST00000365174 120 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 DYNLT3P1-201ENST00000378574 347 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 MIR590-201ENST00000385008 97 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 MIR624-201ENST00000385217 97 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RNA5SP127-201ENST00000411051 133 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 CYCSP48-201ENST00000417124 323 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 MTATP8P2-201ENST00000435212 202 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AF228730.3-201ENST00000436691 102 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 PSMD10P3-201ENST00000437000 448 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 COX6CP6-201ENST00000490840 228 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RN7SL447P-201ENST00000494711 245 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RPL30P5-201ENST00000494923 336 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU6-581P-201ENST00000516214 105 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 RNU6-1337P-201ENST00000516525 95 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 EIF4A1P12-201ENST00000551910 141 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AL034555.1-201ENST00000604816 211 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AL023881.1-201ENST00000621088 301 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AL035470.1-201ENST00000622571 220 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AC112484.5-201ENST00000624189 228 ntBASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA4Q9Y5G9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms