Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB11Q9Y5F2 AP001273.1-201ENST00000624493 3152 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 ZFRP1-201ENST00000457579 2970 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AL590240.1-201ENST00000334118 313 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 RNA5SP205-201ENST00000364653 136 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 Y_RNA.329-201ENST00000365209 107 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 MIR549A-201ENST00000385268 96 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-381P-201ENST00000391259 108 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 SNORA11-201ENST00000408789 128 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 RNA5SP475-201ENST00000410568 110 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 EBAG9P1-201ENST00000418955 543 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 UQCRHP4-201ENST00000471686 272 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AC090525.1-201ENST00000479116 478 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 SCARNA22-201ENST00000503991 125 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 RNU7-121P-201ENST00000516604 62 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AC115990.1-201ENST00000526957 301 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB11Q9Y5F2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC010332.2-201ENST00000613083 1904 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AL133383.2-201ENST00000622958 2336 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-763P-201ENST00000390865 106 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 RPS26P2-201ENST00000440331 348 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 RPS20P10-201ENST00000451209 253 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC108751.2-201ENST00000469993 231 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC091868.1-201ENST00000508746 304 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 Y_RNA.797-201ENST00000515977 94 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 RNA5SP272-201ENST00000516095 111 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 RNU2-12P-201ENST00000517216 168 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 CYP4A27P-201ENST00000567218 190 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC006380.1-201ENST00000603598 186 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AL078604.3-201ENST00000615580 211 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 MIR6830-201ENST00000636015 70 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 FAM35BP-202ENST00000497389 3337 ntBASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB11Q9Y5F2 AC027290.2-201ENST00000623210 18662 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-600P-201ENST00000362524 99 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 RNU1-83P-201ENST00000363426 164 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-727P-201ENST00000363592 107 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AC068538.1-201ENST00000376856 336 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 SNORD20-201ENST00000384550 80 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 SNORA40-201ENST00000388090 126 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 RNU1-82P-201ENST00000390851 165 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 MIR320B2-201ENST00000408479 138 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 VDAC1P3-201ENST00000434069 851 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 NIP7P2-201ENST00000485801 544 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 RPS29P20-201ENST00000489592 171 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AC021739.1-201ENST00000559631 174 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AC074050.1-201ENST00000563247 211 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 AL136164.3-201ENST00000624429 3978 ntBASIC4.59□□□□□ -1.67
PCDHB11Q9Y5F2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB11Q9Y5F2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms