Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PCDHB3Q9Y5E6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 INTS6P1-201ENST00000504674 2530 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RNA5SP123-201ENST00000363244 119 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-647P-201ENST00000364243 107 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 SNORD87-201ENST00000364849 89 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 Y_RNA.361-201ENST00000365515 120 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 SNORA79-201ENST00000408376 140 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-554P-201ENST00000410466 106 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RPL37P4-201ENST00000448908 268 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 SNRPGP8-201ENST00000454064 226 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 RPL30P11-203ENST00000598995 310 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 AL162713.1-201ENST00000604480 262 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 AL591034.3-201ENST00000605511 685 ntBASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDHB3Q9Y5E6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AC069528.2-201ENST00000624849 1991 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AL596211.1-201ENST00000569873 2277 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 Y_RNA.346-201ENST00000365385 112 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 MIRLET7F2-201ENST00000385277 83 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 U3.32-201ENST00000408116 212 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AC244098.2-201ENST00000422068 99 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SKP19-201ENST00000516016 252 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 RNA5SP154-201ENST00000516193 111 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SKP276-201ENST00000516242 268 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AC010300.1-201ENST00000600671 5134 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AP001273.1-201ENST00000624493 3152 ntBASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDHB3Q9Y5E6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-1131P-201ENST00000364955 107 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 SNORD72-201ENST00000390994 80 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 U6atac.2-201ENST00000408644 118 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 HMGN2P30-201ENST00000423237 256 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 HSPE1P21-201ENST00000438283 308 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 RPS4XP2-201ENST00000458402 793 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SL244P-201ENST00000493405 297 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC073073.1-201ENST00000493920 463 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 HMGB1P22-201ENST00000505315 124 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC009163.5-201ENST00000575421 637 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 MIR4458-201ENST00000578872 75 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 ARF4P1-201ENST00000605447 541 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC025754.2-201ENST00000606491 432 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 SNORD11B-201ENST00000607707 90 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 MAPK10-349ENST00000641767 3661 ntBASIC4.92□□□□□ -1.62
PCDHB3Q9Y5E6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 RNU6-978P-201ENST00000364371 103 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 MIR1278-201ENST00000408753 81 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC000111.2-201ENST00000448200 210 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC090897.2-201ENST00000581715 130 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms