Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-336P-201ENST00000364891 107 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RNU5E-7P-201ENST00000365290 117 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RNA5SP167-201ENST00000365461 116 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 MIR1302-6-201ENST00000408466 90 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 MTCO3P19-201ENST00000415864 321 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RPL21P66-201ENST00000426566 466 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-377P-201ENST00000515965 102 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.680-201ENST00000516441 93 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-911P-201ENST00000516523 104 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 SNORA40.15-201ENST00000516884 107 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 OR5D17P-201ENST00000531492 978 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 HSPE1P20-201ENST00000538133 289 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 RPS29P30-201ENST00000600975 111 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 AC078938.1-201ENST00000620993 318 ntBASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB4Q9Y5E5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.19-201ENST00000362462 99 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-78P-201ENST00000362897 107 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 Y_RNA.376-201ENST00000365638 108 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-72P-201ENST00000384285 79 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 MIR325-201ENST00000385260 98 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RPL21P17-201ENST00000397467 475 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC006989.1-201ENST00000427212 131 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 MTCO3P29-201ENST00000432119 779 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 HMGB3P8-201ENST00000449709 577 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-1132P-201ENST00000459214 107 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 RNU6-897P-201ENST00000517135 105 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 U4.7-201ENST00000638126 106 ntBASIC3.84□□□□□ -1.79
PCDHB4Q9Y5E5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB4Q9Y5E5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHB4Q9Y5E5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PCDHB4Q9Y5E5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 OR56A5-201ENST00000340110 738 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 SNORD9-201ENST00000362566 104 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-227P-201ENST00000362865 103 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-770P-201ENST00000363929 105 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.350-201ENST00000365409 98 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AL359837.1-201ENST00000381357 287 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-708P-201ENST00000384217 107 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 Y_RNA.471-201ENST00000384312 102 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 MIR554-201ENST00000384874 96 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RPS29P13-201ENST00000402041 169 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RNU2-38P-201ENST00000410856 79 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC007389.2-201ENST00000434630 306 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 SNORD127-201ENST00000458892 86 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 SNORA70.18-201ENST00000516696 98 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC023632.4-201ENST00000517783 191 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC034114.1-201ENST00000520293 285 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AL590705.4-201ENST00000532209 134 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC006130.2-201ENST00000586202 326 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC006557.5-201ENST00000603126 811 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC008962.1-201ENST00000605729 304 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC130454.1-201ENST00000622948 401 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC027309.3-201ENST00000623419 351 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 U6.99-201ENST00000637524 83 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AC010615.1-201ENST00000594254 1764 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 AP000560.1-201ENST00000624150 1937 ntBASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB4Q9Y5E5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB4Q9Y5E5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB4Q9Y5E5 RNU6-600P-201ENST00000362524 99 ntBASIC3.82□□□□□ -1.8
PCDHB4Q9Y5E5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
PCDHB4Q9Y5E5 MIR607-201ENST00000385241 96 ntBASIC3.82□□□□□ -1.8
PCDHB4Q9Y5E5 MIR493-201ENST00000385254 89 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms