Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.4□□□□□ -1.54
HPS5Q9UPZ3 MIR3653-201ENST00000625572 110 ntBASIC5.4□□□□□ -1.54
HPS5Q9UPZ3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 AC104260.2-201ENST00000623551 3497 ntBASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 CENPCP1-201ENST00000533085 2578 ntBASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HPS5Q9UPZ3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC069528.2-201ENST00000624849 1991 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 MIR659-201ENST00000384963 97 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 Y_RNA.584-201ENST00000391090 114 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 RN7SKP267-201ENST00000410381 285 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 Z85995.1-201ENST00000415547 335 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC146507.2-201ENST00000460608 476 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 RPS20P22-201ENST00000473700 357 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 RNU6-561P-201ENST00000516222 102 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 RNA5SP54-201ENST00000516951 92 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC133485.4-201ENST00000561835 220 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC138907.4-201ENST00000570107 226 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AP001005.3-201ENST00000622049 129 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC005086.4-201ENST00000623065 213 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 AC106871.1-201ENST00000568324 3102 ntBASIC5.39□□□□□ -1.55
HPS5Q9UPZ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC126323.6-202ENST00000568092 3511 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC068647.1-201ENST00000489539 2265 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 Y_RNA.179-201ENST00000363844 90 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 SNORA9-201ENST00000384215 133 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 RNU6-880P-201ENST00000384526 107 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 Y_RNA.558-201ENST00000384685 113 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 MT-TT-201ENST00000387460 66 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 MIR526A2-201ENST00000390198 65 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 MIR921-201ENST00000401133 56 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 RPL23AP93-201ENST00000440847 484 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AL356157.2-201ENST00000605122 111 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC004832.5-201ENST00000608677 401 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC012640.5-201ENST00000623897 319 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 U3.53-201ENST00000628922 216 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 MIR3674-201ENST00000636576 68 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 AC090971.4-201ENST00000560291 1800 ntBASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
HPS5Q9UPZ3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 OR14L1P-202ENST00000641545 3009 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AC010300.1-201ENST00000600671 5134 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AL136164.3-201ENST00000624429 3978 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RNA5SP366-201ENST00000365454 123 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 SNORA72.4-201ENST00000384174 132 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AL591034.1-201ENST00000407447 340 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 U3.40-201ENST00000408706 208 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AC096649.2-201ENST00000416186 393 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 YME1L1P1-201ENST00000429435 297 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 HMGB3P8-201ENST00000449709 577 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 SNORA59A-201ENST00000459326 152 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RNA5SP103-201ENST00000459503 118 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RPS4XP13-201ENST00000483219 789 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RNU6-1061P-201ENST00000516530 99 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RNA5SP290-201ENST00000517133 127 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 RNU2-12P-201ENST00000517216 168 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AC006380.1-201ENST00000603598 186 ntBASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms