Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 SNORA40C-201ENST00000391285 128 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AL356432.1-201ENST00000405809 419 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 CYCSP33-201ENST00000414485 327 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RPL7P10-201ENST00000417407 739 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RN7SL20P-201ENST00000488827 297 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 TBCAP3-201ENST00000512475 312 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RNU6-864P-201ENST00000516256 108 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RN7SKP282-201ENST00000516824 299 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC025755.1-201ENST00000521306 278 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 RAB11AP2-201ENST00000545905 639 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 MIR3942-201ENST00000585264 109 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AL121757.2-201ENST00000611223 313 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 FAM157A-202ENST00000615155 405 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC007318.2-201ENST00000620999 243 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC090617.7-201ENST00000623952 126 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 SNORD113-7-201ENST00000363762 77 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 RNA5SP274-201ENST00000410484 108 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AL592148.1-201ENST00000413568 445 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC011005.2-201ENST00000487324 359 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC008549.1-201ENST00000512900 643 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 SNORA19.2-201ENST00000516013 114 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AP000763.2-201ENST00000540641 163 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC026464.5-201ENST00000562497 722 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 CYCSP39-201ENST00000565821 309 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 MIR3941-201ENST00000582572 103 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 MIR5692C1-201ENST00000585309 91 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC002044.1-201ENST00000606707 158 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AL031601.2-202ENST00000622650 282 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 AC099654.5-201ENST00000636479 350 ntBASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC9Q9UKV0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 MIR412-201ENST00000362142 91 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 U8.2-201ENST00000363156 134 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RNU6-254P-201ENST00000363377 107 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RNU6-266P-201ENST00000364225 107 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RNU6-384P-201ENST00000364900 104 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 MTND4LP16-201ENST00000440828 295 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 BRK1P2-201ENST00000442875 223 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 MRPL50P4-201ENST00000446432 475 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RPL7P43-201ENST00000478876 753 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 RNU6-703P-201ENST00000516946 107 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 CYCSP27-201ENST00000527643 293 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 C8orf59P2-201ENST00000603441 271 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 AL133216.2-202ENST00000634512 349 ntBASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC9Q9UKV0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 SNORD14B-201ENST00000364533 90 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 RNA5SP354-201ENST00000391247 136 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 RAP1BP3-201ENST00000407180 549 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 SKA2P1-201ENST00000425592 390 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 SNORD109B-201ENST00000458961 67 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 SNORD109A-201ENST00000459128 67 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 HMGB1P30-201ENST00000492455 606 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 RPS27P26-201ENST00000494583 239 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 AC103851.1-201ENST00000506833 274 ntBASIC3.49□□□□□ -1.85
HDAC9Q9UKV0 SNORA31.19-201ENST00000517079 126 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms