Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 AL136964.1-201ENST00000622038 2990 ntBASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PPP4R1LQ9P1A2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RNU6-428P-201ENST00000362942 107 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RNA5SP479-201ENST00000364858 117 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RNU6-290P-201ENST00000365212 101 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RNU6-102P-201ENST00000384485 104 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 COX6CP10-201ENST00000416832 224 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC079780.1-201ENST00000428259 207 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 RPL31P61-201ENST00000496160 376 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 SEPT14P8-201ENST00000508026 178 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC053481.4-201ENST00000583164 216 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 SNORD84-203ENST00000584275 78 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AL020997.2-201ENST00000602607 184 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 AC090617.7-201ENST00000623952 126 ntBASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PPP4R1LQ9P1A2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 RNU6-356P-201ENST00000384140 107 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MIR10A-201ENST00000385043 110 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 SNORD78.2-201ENST00000391076 69 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 SNORA57.1-201ENST00000391227 145 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 RPL21P40-201ENST00000428586 483 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 RNU6-861P-201ENST00000516745 106 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AP006245.1-201ENST00000522549 120 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MRPS36P4-201ENST00000534436 298 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AC090617.3-201ENST00000573670 475 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MIR4659A-201ENST00000580269 81 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 Z83818.1-201ENST00000603584 150 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 AC097372.5-201ENST00000623665 376 ntBASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PPP4R1LQ9P1A2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 RNU4-90P-201ENST00000362773 141 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 SNORD63-201ENST00000384262 68 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 AL033519.2-201ENST00000403958 392 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 AC083863.1-201ENST00000438811 231 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 HSPE1P25-201ENST00000455484 251 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 RNU6-377P-201ENST00000515965 102 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 YPEL5P3-201ENST00000547227 352 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 MIR548AI-201ENST00000579940 88 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 AC060766.3-201ENST00000591442 263 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 AL645944.1-201ENST00000603857 493 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 MIR486-1-201ENST00000612171 68 ntBASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PPP4R1LQ9P1A2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 IPO8P1-201ENST00000455509 3109 ntBASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PPP4R1LQ9P1A2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms