Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 Z73417.1-201ENST00000447373 778 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 MTND2P14-201ENST00000482139 351 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 SNORA43.2-201ENST00000516652 128 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 RN7SKP256-201ENST00000517201 314 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC104581.2-201ENST00000572227 430 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC022960.3-201ENST00000619794 441 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 AC007792.1-201ENST00000623023 402 ntBASIC1.57□□□□□ -2.16
CLN6Q9NWW5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLN6Q9NWW5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 RNU6-500P-201ENST00000362349 107 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 SNORD56.1-201ENST00000362913 68 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 RNU6-384P-201ENST00000364900 104 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 SNORD14D-201ENST00000384390 87 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 SNORA24.1-201ENST00000384401 135 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 MIR29B2-201ENST00000385055 81 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AL079342.1-201ENST00000401460 267 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 MIR1283-2-201ENST00000408621 87 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 SNORD56-201ENST00000413522 71 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 BX510359.4-201ENST00000423750 193 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 snoU13.14-201ENST00000459372 104 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AC008549.1-201ENST00000512900 643 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AP005660.1-201ENST00000522972 293 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AC022616.8-201ENST00000533569 253 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 BNIP3P25-201ENST00000596023 559 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
CLN6Q9NWW5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 AC026585.1-201ENST00000619582 524 ntBASIC1.56□□□□□ -2.16
CLN6Q9NWW5 RNU6-944P-201ENST00000364023 107 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RNU11-3P-201ENST00000391111 133 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AL033519.2-201ENST00000403958 392 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RAP1BP3-201ENST00000407180 549 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AL031779.1-201ENST00000415663 330 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 C1DP2-201ENST00000418167 426 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 USP9YP18-201ENST00000425912 695 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 HMGN2P3-201ENST00000433603 273 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 HMGN2P5-201ENST00000436882 273 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RPL30P12-201ENST00000474666 353 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 TPT1P8-201ENST00000510120 555 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC117532.1-201ENST00000514638 323 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 RNU6-965P-201ENST00000516721 96 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 BNIP3P6-201ENST00000549284 499 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC002400.1-201ENST00000569310 726 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC138749.5-201ENST00000611461 208 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC027807.2-201ENST00000616099 408 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC116165.2-201ENST00000616705 206 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AL132822.1-201ENST00000617063 513 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC009878.1-201ENST00000621819 340 ntBASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLN6Q9NWW5 AC002543.1-201ENST00000299783 1954 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 RNU6-1214P-201ENST00000363650 109 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 RNY1P12-201ENST00000364251 105 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 MIR1294-201ENST00000408503 142 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 SRIP3-201ENST00000413200 219 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 EIF4EP2-201ENST00000422816 654 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 MTCYBP5-201ENST00000423752 1135 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AL360271.2-201ENST00000447710 161 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 USP9YP12-201ENST00000450481 570 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 ZNF114P1-201ENST00000453500 292 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 RBBP4P6-201ENST00000508098 202 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms