Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 AL359672.1-201ENST00000442302 409 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC117440.1-201ENST00000474107 571 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 RPL7P43-201ENST00000478876 753 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 RPS29P2-201ENST00000479278 136 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 RNU6-358P-201ENST00000516564 75 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 MIR3199-1-201ENST00000582434 88 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC093913.1-201ENST00000614178 329 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC244517.12-201ENST00000623581 663 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 Z75746.1-201ENST00000440243 2080 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC080128.1-201ENST00000474389 1917 ntBASIC3.21□□□□□ -1.9
NLRC4Q9NPP4 AC108206.1-201ENST00000570186 4159 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RNU6-428P-201ENST00000362942 107 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RNU6-461P-201ENST00000364195 107 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RNU6-622P-201ENST00000384272 103 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 SNORD73A-201ENST00000386062 65 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 BMS1P22-201ENST00000414726 313 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC013470.1-201ENST00000453438 462 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RN7SL807P-201ENST00000470923 297 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AP001025.1-201ENST00000486139 332 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 SNORA25.11-201ENST00000515935 105 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC079598.5-201ENST00000547460 117 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 PSMA3P-201ENST00000555485 635 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC090897.2-201ENST00000581715 130 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC007179.3-201ENST00000604976 235 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 BNIP3P10-201ENST00000605360 577 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 AC097372.5-201ENST00000623665 376 ntBASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NLRC4Q9NPP4 RNU6-254P-201ENST00000363377 107 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 SNORD56.5-201ENST00000364281 72 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 MIR218-1-201ENST00000384999 110 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AL445529.1-201ENST00000398713 389 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 FO393413.1-201ENST00000402892 195 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 BX276092.3-201ENST00000424182 230 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 RPS15AP10-201ENST00000432472 382 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 RPL31P58-201ENST00000469001 379 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AC008628.2-201ENST00000502605 298 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AF213884.2-201ENST00000510417 903 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AP005597.4-201ENST00000526762 229 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 AC103996.1-201ENST00000555468 102 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 MIR3117-201ENST00000584034 78 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 MIR3616-201ENST00000584070 92 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 BNIP3P22-201ENST00000593399 556 ntBASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NLRC4Q9NPP4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 OR56A5-201ENST00000340110 738 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 Y_RNA.86-201ENST00000363020 111 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 Y_RNA.414-201ENST00000384011 101 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 RNA5SP344-201ENST00000411081 104 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 RNU6-293P-201ENST00000411259 106 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 NUP35P1-201ENST00000422734 947 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC096576.1-201ENST00000489014 359 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC018437.1-201ENST00000492214 406 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 CKS1BP7-201ENST00000522230 235 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC018638.8-201ENST00000588755 281 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NLRC4Q9NPP4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms