Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRTNQ9H8Y1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRTNQ9H8Y1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VRTNQ9H8Y1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.64□□□□□ -1.67
VRTNQ9H8Y1 OTUD4P1-201ENST00000237841 3067 ntBASIC4.64□□□□□ -1.67
VRTNQ9H8Y1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 RNU6-961P-201ENST00000363893 105 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.199-201ENST00000364014 102 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.230-201ENST00000364348 109 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 RNA5SP366-201ENST00000365454 123 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 MIR141-201ENST00000384975 95 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 PTMAP5-201ENST00000393073 333 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.595-201ENST00000410403 105 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 PTGES3P4-201ENST00000426243 356 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC010095.1-201ENST00000443543 144 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 ABCF2P2-201ENST00000450549 296 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 RPL23AP81-201ENST00000455252 467 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 SNORA40.9-201ENST00000515895 93 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC100770.1-201ENST00000532310 322 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC010999.1-201ENST00000611856 324 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 AC002543.1-201ENST00000299783 1954 ntBASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VRTNQ9H8Y1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.150-201ENST00000363562 102 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 RNU6-873P-201ENST00000363833 107 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 RNU1-132P-201ENST00000364300 164 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 EI24P2-201ENST00000397776 1076 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 OR4C10P-201ENST00000434991 931 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AL162151.2-201ENST00000448875 158 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AC090525.1-201ENST00000479116 478 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AC006064.5-201ENST00000541782 248 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AL137100.2-201ENST00000555786 315 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AL078605.1-201ENST00000603529 500 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AC011944.2-201ENST00000624440 683 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AL136164.4-201ENST00000625013 2135 ntBASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRTNQ9H8Y1 AC010680.1-201ENST00000590024 3590 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 RNU1-14P-201ENST00000362759 152 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.180-201ENST00000363867 113 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.570-201ENST00000384750 101 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 SNORD66.1-201ENST00000391230 76 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 RPL23AP48-201ENST00000406913 488 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 MIR548M-201ENST00000408260 86 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.793-201ENST00000411222 111 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC016397.1-201ENST00000412463 242 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC112220.1-201ENST00000434628 355 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 HMGB1P37-201ENST00000439613 609 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 NDUFB4P10-201ENST00000452541 359 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.644-201ENST00000459006 113 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 SNORA31.1-201ENST00000515993 133 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 SNORA31.5-201ENST00000516190 133 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 Y_RNA.674-201ENST00000516362 113 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 SNORA31.16-201ENST00000516773 139 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC105137.2-201ENST00000569073 466 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AC114781.5-201ENST00000615297 108 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AL138721.1-201ENST00000616756 179 ntBASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRTNQ9H8Y1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms