Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL109809.4-201ENST00000603520 2185 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 RNU6-996P-201ENST00000365438 107 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 RNU6-517P-201ENST00000384362 110 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 SNORA16.2-201ENST00000390991 127 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 MTCO3P40-201ENST00000392516 676 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 CALM2P3-201ENST00000400429 449 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 CALM1P1-201ENST00000442082 433 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 SCARNA18-201ENST00000459004 134 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AL163973.1-201ENST00000484753 577 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 HMGB1P30-201ENST00000492455 606 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 RPS27P27-201ENST00000498779 255 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC074344.1-201ENST00000512823 224 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 LRRC34P2-201ENST00000514850 553 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 SNORA40.12-201ENST00000516329 111 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 Y_RNA.687-201ENST00000516558 91 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 RN7SKP40-201ENST00000517211 242 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC104383.1-201ENST00000530297 370 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 MTCO3P23-201ENST00000561363 289 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AC012507.3-201ENST00000603556 477 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AL670379.10-201ENST00000604330 253 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AL670379.9-201ENST00000605428 253 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AL354950.2-201ENST00000617939 290 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX25Q9H3E2 AL354685.2-201ENST00000448218 1447 ntBASIC2.51□□□□□ -2.01
SNX25Q9H3E2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNU6-1303P-201ENST00000364841 107 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 SNORD70.1-201ENST00000391007 85 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNU4-53P-201ENST00000410828 140 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 Z98742.2-201ENST00000431564 187 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNU7-180P-201ENST00000459240 63 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNU2-69P-201ENST00000516061 100 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RNU5B-3P-201ENST00000516601 115 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 HIF1AP1-201ENST00000553642 175 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC105137.2-201ENST00000569073 466 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 MYL12BP1-201ENST00000569826 507 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AC087241.4-201ENST00000612441 480 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 RMST_7.1-201ENST00000621935 268 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 AL031601.2-202ENST00000622650 282 ntBASIC2.5□□□□□ -2.01
SNX25Q9H3E2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX25Q9H3E2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 RNU6-858P-201ENST00000362436 107 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 U8.8-201ENST00000365399 135 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 RNU6-393P-201ENST00000384475 107 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL133475.1-201ENST00000404414 305 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC016691.1-201ENST00000441321 413 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 TPTE2P5-203ENST00000458118 728 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 MTAPP1-201ENST00000489154 819 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 IGLV3-17-201ENST00000519099 244 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AP001893.2-201ENST00000526949 202 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL137161.1-201ENST00000532231 390 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL512310.1-201ENST00000548639 172 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 CR383656.8-201ENST00000549046 145 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms