Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TOMM20P4-201ENST00000427861 435 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AL365400.1-201ENST00000431854 640 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC006026.2-201ENST00000457376 180 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RPS29P21-201ENST00000496272 170 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC112206.3-201ENST00000514578 389 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC109329.1-201ENST00000518744 317 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC008749.1-201ENST00000597650 306 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC090578.1-201ENST00000604955 591 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AL139286.2-201ENST00000606838 396 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC008250.2-201ENST00000615261 205 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 RNU6-61P-201ENST00000365528 109 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 MIR578-201ENST00000384828 96 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 SNORA40.3-201ENST00000390964 122 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 ISCA1P6-201ENST00000427740 390 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 CALM2P2-201ENST00000428512 440 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 MTATP6P16-201ENST00000434543 526 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC009961.2-201ENST00000435771 251 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AL137159.1-201ENST00000452808 512 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 MTND3P7-201ENST00000474435 343 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC117522.1-201ENST00000509821 380 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC090572.1-201ENST00000519251 160 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC008521.1-201ENST00000587471 187 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AL138889.2-201ENST00000603883 242 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC091931.1-201ENST00000623488 728 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 SCARNA4-202ENST00000625402 129 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AL157786.1-207ENST00000627771 695 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 AC110994.2-201ENST00000635481 492 ntBASIC2.02□□□□□ -2.09
POLR1EQ9GZS1 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 SNORD116-20-201ENST00000384529 92 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 RNU2-2P-201ENST00000410396 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 RNU2-8P-201ENST00000410727 190 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC018868.1-201ENST00000491307 315 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 Vault.3-201ENST00000516676 95 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 RNU6-667P-201ENST00000517186 102 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 CR383656.8-201ENST00000549046 145 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC098614.4-201ENST00000607601 462 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.15-201ENST00000611544 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.16-201ENST00000613119 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.12-201ENST00000613778 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.20-201ENST00000613956 192 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.9-201ENST00000615427 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.11-201ENST00000616345 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.2-201ENST00000616535 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC108479.2-201ENST00000617314 601 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.3-201ENST00000617785 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.19-201ENST00000618602 191 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms