Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 CEP170P1-201ENST00000502249 4587 ntBASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 MTND5P1-201ENST00000445440 1375 ntBASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM55Q9BYV6 RNU1-105P-201ENST00000363470 161 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 SNORA70.4-201ENST00000365509 134 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC117470.1-201ENST00000381974 330 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 MIR147B-201ENST00000390185 80 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1156P-201ENST00000410365 100 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AL445584.1-201ENST00000431451 330 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC004383.1-201ENST00000438135 289 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AL513124.1-201ENST00000450410 614 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 SNRPGP7-201ENST00000469016 106 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1045P-201ENST00000516321 107 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 RN7SKP83-201ENST00000516512 178 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 RNU5B-3P-201ENST00000516601 115 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC023442.1-201ENST00000531247 422 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 AC039056.2-201ENST00000622261 511 ntBASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
TRIM55Q9BYV6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 SNORA71.3-201ENST00000362582 128 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RNU6-968P-201ENST00000384076 107 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RNU6-700P-201ENST00000391043 107 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 MRPL42P3-201ENST00000401492 326 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AL133475.1-201ENST00000404414 305 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RPS26P21-201ENST00000475397 348 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RPL30P10-201ENST00000488148 337 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RPS27P26-201ENST00000494583 239 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AL590705.4-201ENST00000532209 134 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 MRPS36P4-201ENST00000534436 298 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AL606490.9-201ENST00000603331 271 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AC116312.1-201ENST00000606841 314 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 AC008669.1-201ENST00000565823 2178 ntBASIC3.89□□□□□ -1.79
TRIM55Q9BYV6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 AC233981.2-201ENST00000611524 1614 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1222P-201ENST00000384615 107 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1140P-201ENST00000410517 106 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNA5SP494-201ENST00000410653 129 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MTCYBP10-201ENST00000424905 650 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 GOT2P5-201ENST00000433995 546 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 AC083863.1-201ENST00000438811 231 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 AL441985.1-201ENST00000457727 251 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RPL30P12-201ENST00000474666 353 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 GZMAP1-201ENST00000503054 631 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 AC090877.1-201ENST00000561418 344 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 AL355877.2-201ENST00000603670 358 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MIR1244-1-201ENST00000612829 85 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MIR6075-201ENST00000620782 95 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 SNORA43.4-201ENST00000629559 138 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MIR1244-3-201ENST00000635744 85 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MIR1244-2-201ENST00000636449 85 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 MIR1244-4-202ENST00000636813 85 ntBASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM55Q9BYV6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 MIR208A-201ENST00000362287 71 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNU1-101P-201ENST00000391171 127 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms