Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 Z82217.1-201ENST00000625157 8149 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 SNORD114-19-201ENST00000363072 75 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 U3.8-201ENST00000363675 217 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 U3.9-201ENST00000363823 204 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNA5SP28-201ENST00000363841 119 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNA5SP232-201ENST00000364144 119 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNA5SP90-201ENST00000364801 99 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 SNORA2.3-201ENST00000383920 135 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MIR526A2-201ENST00000390198 65 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU6-750P-201ENST00000390946 107 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU6-381P-201ENST00000391259 108 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 GCNT1P4-201ENST00000404096 329 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU2-51P-201ENST00000410708 197 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNA5SP146-201ENST00000410743 123 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC023141.4-201ENST00000412031 328 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 BTF3P11-201ENST00000426582 477 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AL365496.1-201ENST00000426885 215 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RN7SL517P-201ENST00000462240 305 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RN7SL443P-201ENST00000464331 290 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC103975.1-201ENST00000482506 483 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU6-436P-201ENST00000516171 114 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU2-58P-201ENST00000516403 183 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNU7-121P-201ENST00000516604 62 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RNA5SP392-201ENST00000516905 112 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RN7SKP260-201ENST00000516907 149 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RN7SKP35-201ENST00000517210 151 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC136628.3-201ENST00000521868 290 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 IGKV3D-34-201ENST00000522638 302 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 RN7SL176P-201ENST00000580352 264 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 DEFB117-201ENST00000602356 141 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC000068.2-201ENST00000608816 460 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC069200.1-201ENST00000609511 323 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 uc_338.14-201ENST00000613162 166 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 uc_338.18-201ENST00000615451 175 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MIR6732-201ENST00000619365 60 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC140113.4-201ENST00000622087 222 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MIR8080-201ENST00000622224 89 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 DHX9P1-201ENST00000436565 3076 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 AC010889.1-201ENST00000566193 2666 ntBASIC1.33□□□□□ -2.2
LCE3DQ9BYE3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 AC134026.1-201ENST00000623249 2239 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 MIR375-201ENST00000362103 64 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 RNU6-655P-201ENST00000362858 107 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 RNU1-83P-201ENST00000363426 164 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 Y_RNA.209-201ENST00000364156 111 ntBASIC1.32□□□□□ -2.2
LCE3DQ9BYE3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms