Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VPS25Q9BRG1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VPS25Q9BRG1 U6.112-201ENST00000384129 70 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 SNORD65.1-201ENST00000390889 71 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 MTND1P21-201ENST00000412991 285 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 UBE2V1P10-201ENST00000414685 269 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 RPS15AP12-201ENST00000419498 388 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 GTF2IP13-201ENST00000438487 386 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 MTND1P31-201ENST00000449206 961 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 RPS27AP8-201ENST00000452665 445 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 MTND1P9-201ENST00000453775 944 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 RPS27P22-201ENST00000478056 241 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AC114981.1-201ENST00000503897 678 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AC026414.1-201ENST00000504046 698 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 MIR449C-201ENST00000516047 92 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AL451064.1-201ENST00000607718 471 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AL357080.1-201ENST00000617394 239 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AL589994.2-201ENST00000621124 579 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 AC091895.1-201ENST00000624494 256 ntBASIC0.45□□□□□ -2.34
VPS25Q9BRG1 RNU6-549P-201ENST00000384433 107 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AL359634.1-202ENST00000404721 284 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 RNU2-42P-201ENST00000410697 113 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 CETN4P-201ENST00000432407 469 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 snoU13.30-201ENST00000458951 104 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC117454.1-201ENST00000491120 168 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC091917.2-201ENST00000505002 744 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 RNA5SP503-201ENST00000517047 117 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 SNRPGP1-201ENST00000553864 222 ntBASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS25Q9BRG1 AC107982.1-201ENST00000507171 1300 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RNU6-212P-201ENST00000362642 104 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RNU6-223P-201ENST00000362830 107 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RNU6-457P-201ENST00000363999 107 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 AP1B1P2-201ENST00000416196 106 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 EBAG9P1-201ENST00000418955 543 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 OOSP1P1-201ENST00000423265 274 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RAC1P6-201ENST00000423911 575 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RPL7P55-201ENST00000450522 746 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 SNORA31.3-201ENST00000516029 96 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 SNORA76.2-201ENST00000517095 137 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS25Q9BRG1 AP002906.1-201ENST00000603405 233 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 BNIP3P10-201ENST00000605360 577 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 LINC02555-201ENST00000563933 1951 ntBASIC0.43□□□□□ -2.34
VPS25Q9BRG1 RNU6-1210P-201ENST00000363775 107 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 U8.10-201ENST00000384260 133 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RNU6-14P-201ENST00000384630 106 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 CBX3P9-201ENST00000402326 552 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 MTCYBP15-201ENST00000433123 1127 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AL606517.1-201ENST00000446914 387 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 MTND1P16-201ENST00000465177 898 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RPF2P2-201ENST00000504693 896 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC098799.1-201ENST00000504752 800 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RNU6-1102P-201ENST00000516149 96 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RNU5A-4P-201ENST00000516588 111 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 SNORA70.22-201ENST00000517160 124 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RNU6-165P-201ENST00000517170 99 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC090142.3-201ENST00000519012 385 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AL133153.1-201ENST00000557756 303 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC027807.1-201ENST00000559921 996 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC136618.2-201ENST00000575091 400 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 VN1R80P-201ENST00000597126 338 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AP001981.2-201ENST00000603241 418 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 AC100814.1-201ENST00000606963 623 ntBASIC0.42□□□□□ -2.34
VPS25Q9BRG1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms