Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MIR8057-201ENST00000620957 69 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AC092628.2-201ENST00000622492 339 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.4□□□□□ -1.87
SMOQ99835 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SMOQ99835 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMOQ99835 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SMOQ99835 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SMOQ99835 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMOQ99835 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMOQ99835 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMOQ99835 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMOQ99835 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-428P-201ENST00000362942 107 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-884P-201ENST00000363889 107 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-270P-201ENST00000364131 105 ntBASIC3.39□□□□□ -1.87
SMOQ99835 Y_RNA.422-201ENST00000384054 114 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-72P-201ENST00000384285 79 ntBASIC3.39□□□□□ -1.87
SMOQ99835 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
SMOQ99835 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMOQ99835 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
SMOQ99835 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.39□□□□□ -1.87
SMOQ99835 TMEM167AP1-201ENST00000423409 219 ntBASIC3.39□□□□□ -1.87
SMOQ99835 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
SMOQ99835 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RPS3AP12-201ENST00000443616 753 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.39□□□□□ -1.87
SMOQ99835 AC109925.1-201ENST00000478069 331 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.39□□□□□ -1.87
SMOQ99835 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.39□□□□□ -1.87
SMOQ99835 AC022493.2-201ENST00000506122 481 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.39□□□□□ -1.87
SMOQ99835 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RNU1-61P-201ENST00000516107 151 ntBASIC3.39□□□□□ -1.87
SMOQ99835 RNU6-699P-201ENST00000517081 110 ntBASIC3.39□□□□□ -1.87
SMOQ99835 SNORA70.24-201ENST00000517233 118 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC103996.1-201ENST00000555468 102 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AMZ2P1-203ENST00000565833 850 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC012493.2-201ENST00000595083 291 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.39□□□□□ -1.87
SMOQ99835 AL162730.1-201ENST00000605734 292 ntBASIC3.39□□□□□ -1.87
SMOQ99835 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.39□□□□□ -1.87
SMOQ99835 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMOQ99835 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMOQ99835 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
SMOQ99835 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SMOQ99835 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMOQ99835 RPL9P7-201ENST00000330965 580 ntBASIC3.38□□□□□ -1.87
SMOQ99835 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
SMOQ99835 RNU1-73P-201ENST00000383971 164 ntBASIC3.38□□□□□ -1.87
SMOQ99835 Y_RNA.496-201ENST00000384444 101 ntBASIC3.38□□□□□ -1.87
SMOQ99835 MIR491-201ENST00000384877 84 ntBASIC3.38□□□□□ -1.87
SMOQ99835 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
SMOQ99835 RNU6-174P-201ENST00000410406 106 ntBASIC3.38□□□□□ -1.87
SMOQ99835 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
SMOQ99835 BX276092.3-201ENST00000424182 230 ntBASIC3.38□□□□□ -1.87
SMOQ99835 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
SMOQ99835 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
SMOQ99835 AL513043.1-201ENST00000439124 535 ntBASIC3.38□□□□□ -1.87
SMOQ99835 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.38□□□□□ -1.87
SMOQ99835 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.38□□□□□ -1.87
SMOQ99835 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.38□□□□□ -1.87
SMOQ99835 RN7SL863P-201ENST00000462370 296 ntBASIC3.38□□□□□ -1.87
SMOQ99835 AC010401.1-201ENST00000463867 348 ntBASIC3.38□□□□□ -1.87
SMOQ99835 RPL9P9-202ENST00000466501 579 ntBASIC3.38□□□□□ -1.87
SMOQ99835 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.38□□□□□ -1.87
SMOQ99835 RNU6-988P-201ENST00000519081 107 ntBASIC3.38□□□□□ -1.87
SMOQ99835 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
SMOQ99835 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
SMOQ99835 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMOQ99835 MTND4P1-201ENST00000457501 1466 ntBASIC3.38□□□□□ -1.87
SMOQ99835 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
SMOQ99835 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMOQ99835 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMOQ99835 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMOQ99835 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMOQ99835 AF117829.1-206ENST00000621883 3802 ntBASIC3.37□□□□□ -1.87
SMOQ99835 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
SMOQ99835 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SMOQ99835 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
SMOQ99835 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMOQ99835 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMOQ99835 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.37□□□□□ -1.87
SMOQ99835 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SMOQ99835 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.37□□□□□ -1.87
SMOQ99835 RNU6-898P-201ENST00000365627 104 ntBASIC3.37□□□□□ -1.87
SMOQ99835 RNU6-1035P-201ENST00000384477 107 ntBASIC3.37□□□□□ -1.87
SMOQ99835 MIR518D-201ENST00000385014 87 ntBASIC3.37□□□□□ -1.87
SMOQ99835 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMOQ99835 AL513475.1-201ENST00000406602 315 ntBASIC3.37□□□□□ -1.87
SMOQ99835 AC096664.2-201ENST00000411843 406 ntBASIC3.37□□□□□ -1.87
SMOQ99835 MCFD2P1-201ENST00000417812 300 ntBASIC3.37□□□□□ -1.87
SMOQ99835 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.37□□□□□ -1.87
SMOQ99835 AL160004.2-201ENST00000432935 350 ntBASIC3.37□□□□□ -1.87
SMOQ99835 AC098831.1-201ENST00000440661 216 ntBASIC3.37□□□□□ -1.87
SMOQ99835 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.37□□□□□ -1.87
SMOQ99835 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
SMOQ99835 HIGD1AP2-201ENST00000446367 280 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms