Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SNORD37.1-201ENST00000390968 65 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 SNORA16.2-201ENST00000390991 127 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 MTND3P16-201ENST00000452205 344 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 RPL38P4-201ENST00000502376 214 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AC112206.3-201ENST00000514578 389 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 RNU6-1178P-201ENST00000516674 107 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AL118558.2-201ENST00000556294 238 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AL133241.1-201ENST00000556832 487 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 MIR1273D-201ENST00000577266 86 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 MIR548AC-201ENST00000585049 88 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 uc_338.34-201ENST00000617467 174 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 MIR3662-201ENST00000637030 95 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SIN3AQ96ST3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
SIN3AQ96ST3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 NACAP2-201ENST00000318548 624 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RNU6-395P-201ENST00000365662 106 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 SKA2P1-201ENST00000425592 390 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC096638.1-201ENST00000444678 216 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RN7SL429P-201ENST00000479090 223 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RN7SL489P-201ENST00000486185 223 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RN7SL327P-201ENST00000488659 223 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC025755.1-201ENST00000521306 278 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC073539.2-201ENST00000597113 165 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 SNRPGP19-201ENST00000603826 189 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC013412.1-201ENST00000610687 192 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 RN7SL853P-201ENST00000617250 223 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AP003400.5-201ENST00000624827 617 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIN3AQ96ST3 MTND4P14-201ENST00000435799 1354 ntBASIC3.08□□□□□ -1.92
SIN3AQ96ST3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 SNORD3E-201ENST00000362899 217 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RNU6-884P-201ENST00000363889 107 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 MIR888-201ENST00000401186 77 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RNA5SP425-201ENST00000410336 112 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RPL21P90-201ENST00000415692 466 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RPL30P16-201ENST00000419341 429 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 AL356320.1-201ENST00000429616 163 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 HMGB1P31-201ENST00000437242 427 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 CALM1P1-201ENST00000442082 433 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 snoU13.28-201ENST00000459235 104 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 TRBV1-201ENST00000476502 284 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RPL21P93-201ENST00000480465 489 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RPS29P21-201ENST00000496272 170 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RNU2-69P-201ENST00000516061 100 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 RNU6-703P-201ENST00000516946 107 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 MTND4P7-201ENST00000523876 130 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 MIR6873-201ENST00000622788 63 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.07□□□□□ -1.92
SIN3AQ96ST3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.07□□□□□ -1.92
SIN3AQ96ST3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU4-66P-201ENST00000365199 138 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU6-45P-201ENST00000384471 107 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 SNORD70.1-201ENST00000391007 85 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 SNORA11.4-201ENST00000408823 129 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 HMGN2P35-201ENST00000412164 270 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms