Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.57□□□□□ -2.16
APH1AQ96BI3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.57□□□□□ -2.16
APH1AQ96BI3 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
APH1AQ96BI3 AC241585.2-209ENST00000638217 143 ntBASIC1.57□□□□□ -2.16
APH1AQ96BI3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APH1AQ96BI3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.57□□□□□ -2.16
APH1AQ96BI3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APH1AQ96BI3 OR4G2P-201ENST00000328113 903 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 SNORD116-20-201ENST00000384529 92 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 RNA5SP489-201ENST00000410986 109 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AL008987.1-201ENST00000415528 237 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 snoU109.2-201ENST00000459316 135 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 RPS29P11-201ENST00000496507 171 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AC112204.1-201ENST00000502591 103 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 RNA5SP337-201ENST00000517007 109 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 GNAI2P1-201ENST00000541815 315 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.56□□□□□ -2.16
APH1AQ96BI3 MIR548AC-201ENST00000585049 88 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AC018714.1-201ENST00000605028 208 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 AC091834.1-201ENST00000614543 472 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.56□□□□□ -2.16
APH1AQ96BI3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
APH1AQ96BI3 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 RNU6-660P-201ENST00000364566 109 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 MIR29B2-201ENST00000385055 81 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 MIR513B-201ENST00000385136 84 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL031779.1-201ENST00000415663 330 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL591806.2-201ENST00000433122 173 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL645568.3-201ENST00000433683 316 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC006026.2-201ENST00000457376 180 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 MTCO2P29-201ENST00000465212 189 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 MTND4LP18-201ENST00000526864 291 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.55□□□□□ -2.16
APH1AQ96BI3 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL353778.1-201ENST00000603149 408 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 SEPT7P9-203ENST00000604116 343 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL670379.2-201ENST00000604983 252 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 AL670379.4-201ENST00000605279 254 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 U6.42-201ENST00000618440 107 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.55□□□□□ -2.16
APH1AQ96BI3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
APH1AQ96BI3 SNORD56.2-201ENST00000363242 71 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 RNU4-1-201ENST00000363925 141 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 RNU6-944P-201ENST00000364023 107 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC074117.2-201ENST00000417130 397 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 snoU13.23-201ENST00000458863 104 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 SNORA25.15-201ENST00000516487 89 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 AP000811.1-201ENST00000603803 651 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC012409.4-201ENST00000612923 249 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AL159153.1-201ENST00000619688 317 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC092192.1-201ENST00000633154 1018 ntBASIC1.54□□□□□ -2.16
APH1AQ96BI3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
APH1AQ96BI3 RNU1-58P-201ENST00000362413 163 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 SNORD113-6-201ENST00000363345 75 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 RNU6-384P-201ENST00000364900 104 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC137499.1-201ENST00000427602 88 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AL365400.1-201ENST00000431854 640 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AL606662.1-201ENST00000445763 553 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC108210.2-201ENST00000503681 201 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC020699.1-201ENST00000505161 445 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 SNORA43.2-201ENST00000516652 128 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 RNU6-250P-201ENST00000516958 103 ntBASIC1.53□□□□□ -2.16
APH1AQ96BI3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms