Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 CKS1BP7-201ENST00000522230 235 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 HPRT1P3-201ENST00000539521 576 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 MTND1P15-201ENST00000579262 949 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 AL713866.2-201ENST00000603579 219 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 AC073534.2-201ENST00000620377 381 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 AP003400.5-201ENST00000624827 617 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SKA1Q96BD8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SKA1Q96BD8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 RNU6-655P-201ENST00000362858 107 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 SNORA67.1-201ENST00000364749 141 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 RNU6-1303P-201ENST00000364841 107 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 BTF3L4P1-201ENST00000413813 468 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC008267.5-201ENST00000424928 265 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 RPL32P28-201ENST00000443577 397 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC124916.1-201ENST00000444020 547 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MRPL50P4-201ENST00000446432 475 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC027673.1-201ENST00000456245 405 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 AP000852.1-201ENST00000472460 573 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC093534.1-201ENST00000504977 132 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AC109479.2-201ENST00000517842 174 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AP001893.2-201ENST00000526949 202 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AP003034.1-201ENST00000534621 422 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AP002770.2-201ENST00000543613 532 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 HIF1AP1-201ENST00000553642 175 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR3670-2-201ENST00000582974 65 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR3670-1-201ENST00000584160 65 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR3670-3-201ENST00000584855 65 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 NDUFA8P1-201ENST00000605525 367 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 MIR3670-4-201ENST00000612260 65 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AL354950.2-201ENST00000617939 290 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.83□□□□□ -1.96
SKA1Q96BD8 U4.7-201ENST00000638126 106 ntBASIC2.83□□□□□ -1.96
SKA1Q96BD8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-212P-201ENST00000362642 104 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-37P-201ENST00000362692 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-11P-201ENST00000364234 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-25P-201ENST00000383873 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-1-201ENST00000383898 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 Y_RNA.399-201ENST00000383955 105 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-48P-201ENST00000384161 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-36P-201ENST00000384172 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-4P-201ENST00000384205 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-5P-201ENST00000384238 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-3P-201ENST00000384314 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-16P-201ENST00000384385 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-15P-201ENST00000384534 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-2-201ENST00000384627 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-29P-201ENST00000384637 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-9-201ENST00000384776 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-33P-201ENST00000384793 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 SNORA16.2-201ENST00000390991 127 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-1245P-201ENST00000411130 106 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 Z82209.1-201ENST00000422141 2135 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 MTCYBP8-201ENST00000422855 651 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AP000705.1-201ENST00000454567 350 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 AL163973.1-201ENST00000484753 577 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-377P-201ENST00000515965 102 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 AC069113.1-201ENST00000517763 267 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AC079600.2-201ENST00000550076 130 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AC009063.1-201ENST00000563342 702 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AL670379.2-201ENST00000604983 252 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-6P-201ENST00000606623 107 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 U2.17-201ENST00000611454 95 ntBASIC2.82□□□□□ -1.96
SKA1Q96BD8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
SKA1Q96BD8 RNU6-859P-201ENST00000362728 107 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SKA1Q96BD8 SNORA18.3-201ENST00000384122 132 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 MIR95-201ENST00000385072 81 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 MIR561-201ENST00000385216 97 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AC068050.1-201ENST00000394891 380 ntBASIC2.81□□□□□ -1.96
SKA1Q96BD8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms