Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC021146.2-201ENST00000504736 556 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 RNU6-970P-201ENST00000516312 107 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC006199.1-201ENST00000548728 219 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TTC28Q96AY4 HSBP1P1-201ENST00000555205 166 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC012414.6-201ENST00000568241 401 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 ADAM3B-201ENST00000569937 840 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC133794.1-201ENST00000602731 914 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AC004805.2-201ENST00000605382 482 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 AL590396.4-201ENST00000636779 956 ntBASIC0.5□□□□□ -2.33
TTC28Q96AY4 SNORD115-41-201ENST00000363608 82 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 RNU6-1078P-201ENST00000364522 103 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 RNU6-750P-201ENST00000390946 107 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 Y_RNA.616-201ENST00000410835 95 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL592310.1-201ENST00000414330 671 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 PPP1R11P2-201ENST00000423543 382 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 SNRPEP7-201ENST00000438350 220 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 KATNBL1P6-201ENST00000453433 915 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC112771.1-201ENST00000463581 102 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC021146.9-201ENST00000512503 156 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC093519.1-201ENST00000566109 298 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 DUSP12P1-201ENST00000612874 516 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC130454.1-201ENST00000622948 401 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL136313.1-201ENST00000624804 202 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 SGO1P1-201ENST00000603525 1447 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TTC28Q96AY4 Y_RNA.313-201ENST00000365095 103 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC068050.1-201ENST00000394891 380 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL589655.1-201ENST00000405398 482 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC092634.6-201ENST00000418558 192 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC006512.1-201ENST00000468816 291 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 HMGN2P9-201ENST00000476875 229 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 RNU6-158P-201ENST00000517104 100 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.49□□□□□ -2.33
TTC28Q96AY4 BNIP3P25-201ENST00000596023 559 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AL355297.3-201ENST00000604082 446 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 AP005229.2-201ENST00000609980 697 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 MTND5P17-201ENST00000418405 1603 ntBASIC0.49□□□□□ -2.33
TTC28Q96AY4 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU6-140P-201ENST00000384566 108 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU2-33P-201ENST00000410344 192 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC009310.1-201ENST00000414414 451 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 CCDC58P2-201ENST00000417131 366 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC007435.1-201ENST00000421086 415 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AL160275.3-201ENST00000423876 471 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC093422.3-201ENST00000428506 305 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC007919.1-201ENST00000429380 217 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU6-581P-201ENST00000516214 105 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC022254.1-201ENST00000567857 235 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC023824.3-201ENST00000569003 562 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 MIR4637-201ENST00000582405 84 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC239868.4-201ENST00000608318 671 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC024257.5-201ENST00000612739 531 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC010133.1-201ENST00000615809 842 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC003001.2-201ENST00000616294 831 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 ZNF663P-202ENST00000641770 1131 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC008163.1-202ENST00000636004 2889 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU6-486P-201ENST00000363116 107 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU5E-8P-201ENST00000363502 116 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 SNORD51.1-201ENST00000365405 77 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 MIR1302-8-201ENST00000408342 128 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 RNA5SP137-201ENST00000516833 135 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 EIF1AXP2-201ENST00000555940 413 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC005951.2-201ENST00000576282 495 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AL162730.1-201ENST00000605734 292 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 AC091965.5-201ENST00000624785 342 ntBASIC0.48□□□□□ -2.33
TTC28Q96AY4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TTC28Q96AY4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
TTC28Q96AY4 Y_RNA.172-201ENST00000363765 102 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 RNY3P5-201ENST00000384127 102 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 Y_RNA.583-201ENST00000391033 113 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 NDUFS5P1-201ENST00000405668 289 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms