Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.86□□□□□ -1.95
NPIPB3Q92617 MIR5696-201ENST00000578474 85 ntBASIC2.86□□□□□ -1.95
NPIPB3Q92617 AC008739.2-201ENST00000597006 317 ntBASIC2.86□□□□□ -1.95
NPIPB3Q92617 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.86□□□□□ -1.95
NPIPB3Q92617 MTCO1P12-201ENST00000414273 1543 ntBASIC2.86□□□□□ -1.95
NPIPB3Q92617 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NPIPB3Q92617 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
NPIPB3Q92617 AL359854.1-201ENST00000614203 1594 ntBASIC2.86□□□□□ -1.95
NPIPB3Q92617 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NPIPB3Q92617 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPIPB3Q92617 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPIPB3Q92617 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPB3Q92617 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPB3Q92617 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPB3Q92617 MIR372-201ENST00000362225 67 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 XGY1-201ENST00000381172 446 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 Y_RNA.533-201ENST00000384596 114 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AL512633.1-201ENST00000399931 655 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 RN7SKP61-201ENST00000410642 295 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC096664.2-201ENST00000411843 406 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 CYCSP48-201ENST00000417124 323 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 RPL36AP48-201ENST00000485521 314 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC006445.1-201ENST00000491925 405 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC022447.4-201ENST00000504053 364 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC022493.2-201ENST00000506122 481 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 RNU6-470P-201ENST00000515954 104 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 RNU6-976P-201ENST00000516086 111 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 RNU2-27P-201ENST00000516185 142 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 RNU6-1153P-201ENST00000516760 105 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC109329.1-201ENST00000518744 317 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 CBX3P8-201ENST00000532412 525 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC016256.1-201ENST00000547971 354 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 MIR4425-201ENST00000580572 84 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AL158827.2-201ENST00000602494 330 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 AC006077.1-201ENST00000604746 343 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AL691447.3-201ENST00000635020 330 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPB3Q92617 AP000560.1-201ENST00000624150 1937 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 MFSD8-236ENST00000641509 4050 ntBASIC2.85□□□□□ -1.95
NPIPB3Q92617 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC092268.1-201ENST00000342691 405 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR369-201ENST00000362155 70 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 RNU6-1227P-201ENST00000383981 107 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 RNU6-968P-201ENST00000384076 107 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR30B-201ENST00000384850 88 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR184-201ENST00000384962 84 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR937-201ENST00000401271 86 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 NUP35P1-201ENST00000422734 947 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC078809.1-201ENST00000427601 140 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC005534.2-201ENST00000431047 433 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 AL513124.1-201ENST00000450410 614 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR2053-201ENST00000459295 91 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 RPL27AP5-201ENST00000469428 449 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC068781.1-201ENST00000488231 618 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC104564.1-201ENST00000493028 407 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC026784.1-201ENST00000507986 352 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC091874.1-201ENST00000511402 339 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 SCARNA17.1-201ENST00000516211 143 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 SNORA31.6-201ENST00000516241 130 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 SCARNA17.2-201ENST00000516334 143 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC007991.1-201ENST00000522680 631 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC079598.5-201ENST00000547460 117 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AL442663.2-201ENST00000554385 511 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC007375.1-201ENST00000554513 578 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 TGIF1P1-201ENST00000558095 802 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC007448.1-201ENST00000582714 234 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR4765-201ENST00000585007 77 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 MIR4443-201ENST00000585052 53 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 RPL23AP78-201ENST00000599928 470 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 7SK.7-201ENST00000603504 247 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AL137843.1-201ENST00000605078 385 ntBASIC2.84□□□□□ -1.95
NPIPB3Q92617 AC069200.1-201ENST00000609511 323 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms